Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene81095 SustainPine v2.0 720
AutoFact: No apical meristem (NAM) protein [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein sombrero 0.0
Putative N-terminus
sp_v2.0_unigene81290 SustainPine v2.0 464
AutoFact: Chromatin remodeling complex subunit n=2 Tax=Populus trichocarpa RepID=B9H9I8_POPTR 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 6.30584e-44
Internal
sp_v2.0_unigene81496 SustainPine v2.0 767
AutoFact: Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO 7.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 7.38022e-31
Putative Complete
sp_v2.0_unigene82018 SustainPine v2.0 446
AutoFact: putative protein kinase (AME2/AFC1) [Oryza sativa Japonica Group] 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase afc1 2.28407e-27
Putative N-terminus
sp_v2.0_unigene82067 SustainPine v2.0 950
AutoFact: putative protein kinase (AME2/AFC1) [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase afc1 0.0
C-terminus
sp_v2.0_unigene82085 SustainPine v2.0 695
AutoFact: Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 3.06952e-29
Putative Complete
sp_v2.0_unigene84796 SustainPine v2.0 440
AutoFact: ania-6a type cyclin [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclin-l1-1 0.0
Internal
sp_v2.0_unigene85559 SustainPine v2.0 623
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: protein 2.62767e-23
C-terminus
sp_v2.0_unigene85900 SustainPine v2.0 630
AutoFact: Histidyl-tRNA synthetase n=3 Tax=Andropogoneae RepID=B6TS97_MAIZE 0.0
FL-Next: sp=Histidyl-tRNA synthetase; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: histidyl-trna synthetase 0.0
Internal
sp_v2.0_unigene85949 SustainPine v2.0 666
AutoFact: R2R3-MYB transcription factor MYB2 n=3 Tax=Pinus RepID=Q27IN8_PINTA 0.0
FL-Next: tr=R2R3-MYB transcription factor MYB2; Pinus taeda (Loblolly pine). 0.0
Blast2go: 40s ribosomal protein s10-like protein 0.0
Internal
sp_v2.0_unigene86373 SustainPine v2.0 626
AutoFact: Ethylene-responsive element binding protein1 homolog n=1 Tax=Matricaria chamomilla RepID=Q9SST7_9ASTR 8.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: erebp-2 protein 0.0
Internal
sp_v2.0_unigene86411 SustainPine v2.0 681
AutoFact: GRAS domain containing protein 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: scarecrow-like protein 1-like 5.81339e-36
C-terminus
sp_v2.0_unigene86448 SustainPine v2.0 506
AutoFact: putative protein kinase (AME2/AFC1) [Oryza sativa Japonica Group] 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase afc1 0.0
C-terminus
sp_v2.0_unigene89502 SustainPine v2.0 415
AutoFact: small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana] ref|NP_849414.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana] ref|NP_001031682.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis 2.0e-26
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 2.35984e-33
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain