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Assembly Name: uagpf v2.0

Name: F-box domain, cyclin-like

Term: IPR001810  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene5678 uagpf v2.0 632
AutoFact: O-FucT domain containing protein 0.0
Blast2go: duf246 domain-containing protein at1g04910-like 0.0
unknown
uagpf_v2_unigene5711 uagpf v2.0 575
AutoFact: Phytochrome A-associated F-box protein, putative n=1 Tax=Ricinus communis RepID=B9SAQ8_RICCO 0.0
Blast2go: phytochrome a-associated f-box protein 0.0
unknown
uagpf_v2_unigene5855 uagpf v2.0 524
AutoFact: F-box protein 7 n=2 Tax=Arabidopsis RepID=SKI32_ARATH 0.0
FL-Next: sp=F-box protein 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein 0.0
N-terminus
uagpf_v2_unigene6160 uagpf v2.0 872
AutoFact: Cationic amino acid transporter n=1 Tax=Populus trichocarpa RepID=B9IPU4_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: cationic amino acid transporter 0.0
C-terminus
uagpf_v2_unigene6437 uagpf v2.0 560
AutoFact: BHLH transcription factor PTF1-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6EPZ6_ORYSJ 9.94922e-44
Blast2go: transcription factor bhlh66-like 0.0
unknown
uagpf_v2_unigene6461 uagpf v2.0 631
AutoFact: Cyclin-like F-box [Medicago truncatula] 9.99995e-41
Blast2go: f-box protein at4g00755-like 0.0
unknown
uagpf_v2_unigene6538 uagpf v2.0 632
AutoFact: NXRV092_H05_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV092_H05 5' similar to Arabidopsis thaliana sequence At2g13930 putative retroelement pol polyprotein see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence. 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical protein VITISV_004415 [Vitis vinifera] 0.0
Internal
uagpf_v2_unigene6614 uagpf v2.0 590
AutoFact: F-box family protein n=1 Tax=Populus trichocarpa RepID=B9HSY9_POPTR 0.0
Blast2go: f-box family protein 0.0
unknown
uagpf_v2_unigene6651 uagpf v2.0 550
AutoFact: F-box family protein n=2 Tax=Populus trichocarpa RepID=B9IPW7_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
C-terminus
uagpf_v2_unigene6681 uagpf v2.0 1690
AutoFact: uncharacterized protein [Arabidopsis thaliana] sp|Q9STN5.1|Y4833_ARATH RecName: Full=Uncharacterized protein At4g08330, chloroplastic; Flags: Precursor emb|CAB52555.1| putative protein [Arabidopsis thaliana] emb|CAB77958.1| putative protein [Arabidopsis t 3.0e-26
FL-Next: sp=Uncharacterized protein At4g08330, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein chloroplastic-like 1.75428e-36
Putative Complete
uagpf_v2_unigene6721 uagpf v2.0 873
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
Blast2go: f-box family protein 0.0
Putative coding
uagpf_v2_unigene6834 uagpf v2.0 636
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
Blast2go: f-box family protein 0.0
unknown
uagpf_v2_unigene6866 uagpf v2.0 390
AutoFact: Unassigned protein
Blast2go: uncharacterized protein chloroplastic-like 0.0
Coding
uagpf_v2_unigene6906 uagpf v2.0 1367
AutoFact: GK15001 gene product from transcript GK15001-RA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein VITISV_037436 [Vitis vinifera] 0.0
N-terminus
uagpf_v2_unigene7002 uagpf v2.0 632
AutoFact: Putative F-box GID2 protein n=1 Tax=Selaginella moellendorffii RepID=A9LY18_SELML 5.0e-18
FL-Next: sp=F-box protein SNE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein sne 8.26759e-22
Complete
uagpf_v2_unigene7063 uagpf v2.0 723
AutoFact: F-box protein FBW2 [Arabidopsis thaliana] ref|NP_849346.1| F-box protein FBW2 [Arabidopsis thaliana] ref|NP_974523.1| F-box protein FBW2 [Arabidopsis thaliana] ref|NP_001078359.1| F-box protein FBW2 [Arabidopsis thaliana] ref|NP_001154215.1| F-box protein 0.0
Blast2go: f-box protein fbw2 0.0
unknown
uagpf_v2_unigene7122 uagpf v2.0 679
AutoFact: F-box protein PP2-B10 [Arabidopsis thaliana] sp|Q9ZVQ6.1|P2B10_ARATH RecName: Full=F-box protein PP2-B10; AltName: Full=Protein PHLOEM PROTEIN 2-LIKE B10; Short=AtPP2-B10 gb|AAC78518.1| putative phloem-specific lectin [Arabidopsis thaliana] gb|ABF83689.1| 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein pp2-b15 0.0
C-terminus
uagpf_v2_unigene7163 uagpf v2.0 1138
AutoFact: F-box/kelch-repeat protein [Arabidopsis thaliana] sp|Q9FKJ0.1|FK132_ARATH RecName: Full=F-box/kelch-repeat protein At5g60570 dbj|BAB08240.1| unnamed protein product [Arabidopsis thaliana] gb|ABM06035.1| At5g60570 [Arabidopsis thaliana] gb|AED97346.1| F-bo 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
N-terminus
uagpf_v2_unigene7167 uagpf v2.0 935
AutoFact: F-box/kelch-repeat protein [Arabidopsis thaliana] sp|Q6NPN5.1|FK113_ARATH RecName: Full=F-box/kelch-repeat protein At5g26960 gb|AAR24662.1| At5g26960 [Arabidopsis thaliana] gb|AED93634.1| F-box/kelch-repeat protein [Arabidopsis thaliana] 0.0
FL-Next: sp=F-box/kelch-repeat protein At5g26960; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene7273 uagpf v2.0 551
AutoFact: ASF/SF2-like pre-mRNA splicing factor SRP32' [Zea mays] 0.0
Blast2go: arginine serine-rich splicing 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain