Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Helicase, C-terminal

Term: IPR001650  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene34264 uagpf v2.0 352
AutoFact: DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] sp|Q9FNM7.2|RH26_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 26 gb|AED91329.1| DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] 0.0
Blast2go: rna helicase 0.0
Coding
uagpf_v2_unigene34505 uagpf v2.0 312
AutoFact: SNF2 and helicase domain-containing protein [Arabidopsis thaliana] gb|AAC97224.1| putative helicase [Arabidopsis thaliana] gb|AAL24339.1| SNF2/RAD54 family (ETL1 subfamily) protein [Arabidopsis thaliana] gb|AAO00936.1| SNF2/RAD54 family (ETL1 subfamily) p 0.0
FL-Next: tr=ATP binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: snf2 family dna-dependent atpase 0.0
Internal
uagpf_v2_unigene34904 uagpf v2.0 279
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 42-like 0.0
Internal
uagpf_v2_unigene34977 uagpf v2.0 480
AutoFact: SPFH/Band 7/PHB domain-containing membrane-associated protein [Arabidopsis thaliana] dbj|BAA97132.1| unnamed protein product [Arabidopsis thaliana] dbj|BAC43259.1| unknown protein [Arabidopsis thaliana] gb|AAO63407.1| At5g54100 [Arabidopsis thaliana] gb|A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: band 7 family protein 0.0
Internal
uagpf_v2_unigene34978 uagpf v2.0 119
AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 5.0e-07
Blast2go: probable atp-dependent rna helicase ythdc2-like 2.25235e-16
unknown
uagpf_v2_unigene35577 uagpf v2.0 299
AutoFact: putative Helicase SKI2W [Oryza sativa Japonica Group] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene35588 uagpf v2.0 124
AutoFact: MIP-T3 multi-domain protein 8.0e-16
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: f-box-like wd repeat-containing protein tbl1xr1-like 0.0
Internal
uagpf_v2_unigene35608 uagpf v2.0 285
AutoFact: DEAD-box ATP-dependent RNA helicase 6 n=6 Tax=BEP clade RepID=RH6_ORYSJ 0.0
Blast2go: dead-box atp-dependent rna helicase 8-like 0.0
unknown
uagpf_v2_unigene35864 uagpf v2.0 105
AutoFact: DNA helicase recq1, putative n=1 Tax=Ricinus communis RepID=B9S1J8_RICCO 0.0
Blast2go: atp-dependent dna helicase q-like 2 0.0
unknown
uagpf_v2_unigene36440 uagpf v2.0 543
AutoFact: DEAD-box ATP-dependent RNA helicase 21 [Arabidopsis thaliana] sp|P93008.1|RH21_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 21 gb|AAC69128.1| putative U5 small nuclear ribonucleoprotein, an RNA helicase [Arabidopsis thaliana] gb|AAL38370.1| put 0.0
Blast2go: dead-box atp-dependent rna helicase 0.0
unknown
uagpf_v2_unigene36562 uagpf v2.0 263
AutoFact: Putative SWI/SNF related, matrix associated, actin dependent regulator of chromatin [Oryza sativa] dbj|BAB64747.1| putative DNA-dependent ATPase [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Probable chromatin-remodeling complex ATPase chain; Oryza sativa subsp. japonica (Rice). 0.0
Internal
uagpf_v2_unigene36742 uagpf v2.0 442
AutoFact: SNF2 and helicase domain-containing protein [Arabidopsis thaliana] gb|AAC97224.1| putative helicase [Arabidopsis thaliana] gb|AAL24339.1| SNF2/RAD54 family (ETL1 subfamily) protein [Arabidopsis thaliana] gb|AAO00936.1| SNF2/RAD54 family (ETL1 subfamily) p 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf2 family dna-dependent atpase 0.0
Complete
uagpf_v2_unigene36760 uagpf v2.0 475
AutoFact: ATP-dependent DNA helicase Q-like 2 [Arabidopsis thaliana] sp|Q9FT73.1|RQL2_ARATH RecName: Full=ATP-dependent DNA helicase Q-like 2; AltName: Full=RecQ-like protein 2; Short=AtRecQ2; Short=AtRecQl2 emb|CAC14866.1| DNA Helicase [Arabidopsis thaliana] gb|AE 3.99931e-42
FL-Next: sp=ATP-dependent DNA helicase Q-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent dna helicase q-like 2-like 0.0
Putative N-terminus
uagpf_v2_unigene36968 uagpf v2.0 376
AutoFact: chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] dbj|BAF34944.1| chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] gb|EEE69802.1| hypothetical protein OsJ_29535 [Oryza sativa Japonica Group] 0.0
Blast2go: chromatin remodeling complex subunit 0.0
unknown
uagpf_v2_unigene36979 uagpf v2.0 459
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 13 dbj|BAA95778.1| ATP-dependent RNA helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 13 0.0
Putative Complete
uagpf_v2_unigene37129 uagpf v2.0 476
AutoFact: putative chromodomain-helicase-DNA-binding protein [Arabidopsis thaliana] 0.0
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
uagpf_v2_unigene37158 uagpf v2.0 452
AutoFact: WS03929.C21_I18 SS-B-24 Picea sitchensis cDNA clone WS03929_I18 3', mRNA sequence. 0.0
Coding
uagpf_v2_unigene37165 uagpf v2.0 406
AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
Blast2go: atp-dependent helicase brm-like 0.0
Coding
uagpf_v2_unigene37202 uagpf v2.0 448
AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent helicase brm-like 0.0
Internal
uagpf_v2_unigene37388 uagpf v2.0 438
AutoFact: pfam00270, DEAD, DEAD/DEAH box helicase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain