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Assembly Name: uagpf v2.0

Name: RNA helicase, ATP-dependent, DEAD-box, conserved site

Term: IPR000629  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene31892 uagpf v2.0 481
AutoFact: RNA helicase n=1 Tax=Vigna radiata var. radiata RepID=Q9M6R6_VIGRR 0.0
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 7; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dead-box atp-dependent rna helicase 7-like 0.0
Internal
uagpf_v2_unigene31959 uagpf v2.0 728
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 13 dbj|BAA95778.1| ATP-dependent RNA helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 13 0.0
C-terminus
uagpf_v2_unigene32002 uagpf v2.0 293
AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene32080 uagpf v2.0 309
AutoFact: RNA helicase n=1 Tax=Vigna radiata var. radiata RepID=Q9M6R6_VIGRR 0.0
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 7; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dead-box atp-dependent rna helicase 7-like 0.0
Internal
uagpf_v2_unigene33122 uagpf v2.0 147
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9T0X5_RICCO 0.0
FL-Next: sp=Putative DEAD-box ATP-dependent RNA helicase 29; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dead-box atp-dependent rna helicase 29-like 0.0
Internal
uagpf_v2_unigene33167 uagpf v2.0 403
AutoFact: putative transcription factor [Oryza sativa Japonica Group] gb|ABB47886.2| expressed protein [Oryza sativa Japonica Group] 3.0e-36
Blast2go: protein 2.25609e-43
unknown
uagpf_v2_unigene33776 uagpf v2.0 415
AutoFact: putative DEAD-box protein abstrakt [Trifolium pratense] 0.0
Blast2go: dead-box protein abstrakt 0.0
Coding
uagpf_v2_unigene34256 uagpf v2.0 156
AutoFact: DEAD-box ATP-dependent RNA helicase 18 [Arabidopsis thaliana] sp|Q9FLB0.1|RH18_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 18 dbj|BAB09988.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AED90875.1| DEAD-box ATP-dependent 9.0e-27
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 18; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dead-box atp-dependent rna helicase 18-like 6.30339e-35
Internal
uagpf_v2_unigene34264 uagpf v2.0 352
AutoFact: DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] sp|Q9FNM7.2|RH26_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 26 gb|AED91329.1| DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] 0.0
Blast2go: rna helicase 0.0
Coding
uagpf_v2_unigene34440 uagpf v2.0 194
AutoFact: Cytochrome P450 monooxygenase CYP86A24 n=1 Tax=Glycine max RepID=Q2LAK8_SOYBN 0.0
FL-Next: sp=Cytochrome P450 86A1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cytochrome p450 0.0
Internal
uagpf_v2_unigene34904 uagpf v2.0 279
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 42-like 0.0
Internal
uagpf_v2_unigene35588 uagpf v2.0 124
AutoFact: MIP-T3 multi-domain protein 8.0e-16
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: f-box-like wd repeat-containing protein tbl1xr1-like 0.0
Internal
uagpf_v2_unigene35608 uagpf v2.0 285
AutoFact: DEAD-box ATP-dependent RNA helicase 6 n=6 Tax=BEP clade RepID=RH6_ORYSJ 0.0
Blast2go: dead-box atp-dependent rna helicase 8-like 0.0
unknown
uagpf_v2_unigene36146 uagpf v2.0 663
AutoFact: Caltractin n=1 Tax=Atriplex nummularia RepID=CATR_ATRNU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: caltractin 0.0
Complete
uagpf_v2_unigene36440 uagpf v2.0 543
AutoFact: DEAD-box ATP-dependent RNA helicase 21 [Arabidopsis thaliana] sp|P93008.1|RH21_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 21 gb|AAC69128.1| putative U5 small nuclear ribonucleoprotein, an RNA helicase [Arabidopsis thaliana] gb|AAL38370.1| put 0.0
Blast2go: dead-box atp-dependent rna helicase 0.0
unknown
uagpf_v2_unigene36979 uagpf v2.0 459
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 13 dbj|BAA95778.1| ATP-dependent RNA helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 13 0.0
Putative Complete
uagpf_v2_unigene37158 uagpf v2.0 452
AutoFact: WS03929.C21_I18 SS-B-24 Picea sitchensis cDNA clone WS03929_I18 3', mRNA sequence. 0.0
Coding
uagpf_v2_unigene37388 uagpf v2.0 438
AutoFact: pfam00270, DEAD, DEAD/DEAH box helicase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene37405 uagpf v2.0 359
AutoFact: DEAD-box ATP-dependent RNA helicase 36 [Arabidopsis thaliana] sp|Q9SA27.1|RH36_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 36 gb|AAD34681.1|AC006341_9 Similar to gb|L13612 DEAD-box protein (dbp45A) from Drosophila melanogaster and is a member 0.0
Blast2go: dead-box atp-dependent rna helicase 36-like 0.0
unknown
uagpf_v2_unigene37493 uagpf v2.0 510
AutoFact: DEAD-box ATP-dependent RNA helicase 21 [Arabidopsis thaliana] sp|P93008.1|RH21_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 21 gb|AAC69128.1| putative U5 small nuclear ribonucleoprotein, an RNA helicase [Arabidopsis thaliana] gb|AAL38370.1| put 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain