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Assembly Name: uagpf v2.0

Name: RmlC-like jelly roll fold

Term: IPR014710  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene35522 uagpf v2.0 413
AutoFact: RVT_2 domain containing protein 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical retrotransposon 0.0
Internal
uagpf_v2_unigene35977 uagpf v2.0 462
AutoFact: Inward rectifying potassium channel n=1 Tax=Cucumis melo RepID=Q0R4Q4_CUCME 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium channel 2.55815e-16
C-terminus
uagpf_v2_unigene35978 uagpf v2.0 403
AutoFact: Potassium channel n=2 Tax=Solanum RepID=Q9LEG6_SOLLC 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium channel 1.19532e-29
Internal
uagpf_v2_unigene36018 uagpf v2.0 638
AutoFact: Germin-like protein n=5 Tax=Pinaceae RepID=O65010_PINRA 0.0
FL-Next: tr=Germin-like protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: germin-like protein 0.0
C-terminus
uagpf_v2_unigene36527 uagpf v2.0 416
AutoFact: GK15001 gene product from transcript GK15001-RA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein VITISV_037436 [Vitis vinifera] 0.0
Internal
uagpf_v2_unigene36675 uagpf v2.0 330
AutoFact: Putative auxin-binding protein 1 n=1 Tax=Boehmeria nivea RepID=A8W7I6_BOENI 0.0
FL-Next: sp=Auxin-binding protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: auxin-binding protein 1 0.0
N-terminus
uagpf_v2_unigene36765 uagpf v2.0 455
AutoFact: putative cAMP-dependent protein kinase [Arabidopsis thaliana] 0.0
Blast2go: protein phosphatase 2c and cyclic nucleotide-binding kinase domain-containing protein 0.0
unknown
uagpf_v2_unigene37573 uagpf v2.0 500
AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polx_tobac ame: full=retrovirus-related pol polyprotein from transposon tnt 1-94 includes: ame: full=protease includes: ame: full=reverse transcriptase includes: ame: full=endonuclease 0.0
Internal
uagpf_v2_unigene37918 uagpf v2.0 406
AutoFact: cupin domain-containing protein [Arabidopsis thaliana] emb|CAB39783.1| putative protein [Arabidopsis thaliana] emb|CAB78153.1| putative protein [Arabidopsis thaliana] gb|ABK32147.1| At4g10300 [Arabidopsis thaliana] gb|AEE82865.1| cupin domain-containing p 5.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: enzyme of the cupin superfamily 0.0
Complete
uagpf_v2_unigene38204 uagpf v2.0 461
AutoFact: NV19190; similar to pol polyprotein 6.0e-14
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical protein VITISV_040966 [Vitis vinifera] 4.34763e-40
Putative N-terminus
uagpf_v2_unigene38293 uagpf v2.0 524
AutoFact: putative cAMP-dependent protein kinase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 2c and cyclic nucleotide-binding kinase domain-containing protein 0.0
Internal
uagpf_v2_unigene38826 uagpf v2.0 411
AutoFact: Cell wall protein Exp4 n=1 Tax=Mirabilis jalapa RepID=Q84L38_MIRJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-expansin 8 0.0
Putative N-terminus
uagpf_v2_unigene39083 uagpf v2.0 340
AutoFact: putative cyclic nucleotide-regulated ion channel protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 17; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cyclic nucleotide-gated ion 0.0
Internal
uagpf_v2_unigene40980 uagpf v2.0 350
AutoFact: GK15001 gene product from transcript GK15001-RA 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 5.69106e-27
Internal
uagpf_v2_unigene41156 uagpf v2.0 479
AutoFact: Os02g0773400 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6ZHE3_ORYSJ 2.0e-28
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable cyclic nucleotide-gated ion channel chloroplastic-like 3.01608e-34
Internal
uagpf_v2_unigene41901 uagpf v2.0 451
AutoFact: Cyclic nucleotide-gated ion channel, putative n=1 Tax=Ricinus communis RepID=B9SIE1_RICCO 0.0
FL-Next: sp=Cyclic nucleotide-gated ion channel 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cyclic nucleotide-gated ion channel 4 0.0
Internal
uagpf_v2_unigene42861 uagpf v2.0 313
AutoFact: cyclic nucleotide gated channel [Arabidopsis thaliana] sp|Q9LD37.1|CNG20_ARATH RecName: Full=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; AltName: Full=Cyclic nucleotide-binding transporter 1; Flags: Precursor gb|AAF73128.1|AF148541_1 c 2.0e-37
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable cyclic nucleotide-gated ion channel chloroplastic-like 0.0
Internal
uagpf_v2_unigene43822 uagpf v2.0 305
AutoFact: Potassium channel KAT2, putative n=1 Tax=Ricinus communis RepID=B9S124_RICCO 9.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium channel 6.94108e-36
Internal
uagpf_v2_unigene45693 uagpf v2.0 344
AutoFact: germin-like protein [Pinus sylvestris] 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: germin-like protein 1.87754e-40
N-terminus
uagpf_v2_unigene45842 uagpf v2.0 296
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_69.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7T0J2_VITVI 0.0
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 17; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable cyclic nucleotide-gated ion channel 17-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain