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Assembly Name: uagpf v2.0

Name: Zinc finger, C2H2-like

Term: IPR015880  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene26148 uagpf v2.0 272
• AutoFact: ATP-synt_B multi-domain protein 6.0e-06
• Blast2go: nucleic acid binding 0.0
unknown
uagpf_v2_unigene26164 uagpf v2.0 440
• AutoFact: zinc ion binding protein [Arabidopsis thaliana] gb|AAM14872.1| Expressed protein [Arabidopsis thaliana] gb|ABD19677.1| At2g19385 [Arabidopsis thaliana] gb|AEC06875.1| zinc ion binding protein [Arabidopsis thaliana] 0.0
• Blast2go: cell growth-regulating nucleolar 0.0
unknown
uagpf_v2_unigene26241 uagpf v2.0 459
• AutoFact: putative zinc-finger protein [Oryza sativa Japonica Group] 3.0e-14
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: zinc-finger protein 3.52208e-22
Internal
uagpf_v2_unigene26373 uagpf v2.0 248
• AutoFact: Dimer_Tnp_hAT domain containing protein 8.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 1.02347e-36
Internal
uagpf_v2_unigene26397 uagpf v2.0 419
• AutoFact: Dimer_Tnp_hAT domain containing protein 7.0e-11
• Blast2go: uncharacterized protein loc100255782 0.0
Coding
uagpf_v2_unigene26482 uagpf v2.0 347
• AutoFact: homeobox protein HAT3.1 [Arabidopsis thaliana] sp|Q04996.3|HAT31_ARATH RecName: Full=Homeobox protein HAT3.1 dbj|BAC41784.1| putative homeobox protein HAT3.1 [Arabidopsis thaliana] gb|AAO64900.1| At3g19510 [Arabidopsis thaliana] gb|AEE76250.1| homeobox pr 0.0
• Blast2go: homeobox protein 0.0
Coding
uagpf_v2_unigene26724 uagpf v2.0 507
• AutoFact: inactive ubiquitin carboxyl-terminal hydrolase 53 [Mus musculus] sp|P15975.2|UBP53_MOUSE RecName: Full=Inactive ubiquitin carboxyl-terminal hydrolase 53; AltName: Full=Inactive ubiquitin-specific peptidase 53; AltName: Full=Per-hexamer repeat protein 3 db 5.0e-30
• Blast2go: ubiquitin carboxyl-terminal hydrolase-related protein 0.0
unknown
uagpf_v2_unigene26986 uagpf v2.0 291
• AutoFact: Zinc finger protein 622 [Arabidopsis thaliana] gb|AAN12920.1| putative zinc finger protein [Arabidopsis thaliana] gb|AEE85908.1| Zinc finger protein 622 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger protein 622 0.0
Internal
uagpf_v2_unigene27071 uagpf v2.0 427
• AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Populus trichocarpa RepID=B9N2M4_POPTR 0.0
• Blast2go: ubiquitin carboxyl-terminal hydrolase 23-like 0.0
Coding
uagpf_v2_unigene27426 uagpf v2.0 149
• AutoFact: [R] COG5048 FOG: Zn-finger 2.0e-08
• Blast2go: transcription factor iiia 0.0
unknown
uagpf_v2_unigene27541 uagpf v2.0 511
• AutoFact: Ubiquitin-specific protease family C19-related protein [Arabidopsis thaliana] sp|Q9FZ45.1|Y1686_ARATH RecName: Full=Uncharacterized membrane protein At1g16860 gb|AAF99847.1|AC051629_14 Unknown protein [Arabidopsis thaliana] gb|AAK92824.1| unknown protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized membrane protein at1g16860-like 0.0
N-terminus
uagpf_v2_unigene27568 uagpf v2.0 595
• AutoFact: Putative endonuclease or glycosyl hydrolase [Arabidopsis thaliana] emb|CAB71880.1| putative protein [Arabidopsis thaliana] gb|AEE80322.1| Putative endonuclease or glycosyl hydrolase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene27691 uagpf v2.0 376
• AutoFact: Endoribonuclease Dicer homolog 1 n=4 Tax=Poaceae RepID=DCL1_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: endoribonuclease dicer homolog 1-like 0.0
N-terminus
uagpf_v2_unigene27875 uagpf v2.0 443
• AutoFact: HAT family dimerization domain-containing protein n=1 Tax=Arabidopsis thaliana RepID=F4KHA1_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hat family dimerization domain-containing protein 0.0
Putative C-terminus
uagpf_v2_unigene27920 uagpf v2.0 253
• AutoFact: DUF1644 domain containing protein 6.0e-39
• Blast2go: uncharacterized protein 0.0
unknown
uagpf_v2_unigene27977 uagpf v2.0 307
• AutoFact: putative tRNA isopentenylpyrophosphatase [Ipomoea trifida] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: trna isopentenyltransferase 0.0
C-terminus
uagpf_v2_unigene28043 uagpf v2.0 297
• AutoFact: zinc finger protein 6 [Arabidopsis thaliana] sp|Q39265.1|ZFP6_ARATH RecName: Full=Zinc finger protein 6 gb|AAF98212.1|AC007152_8 zinc finger protein zep6 [Arabidopsis thaliana] gb|AAA87302.1| zinc finger protein [Arabidopsis thaliana] gb|AAK91404.1| At1g6 3.0e-09
• Blast2go: zinc finger protein 4.09356e-10
Putative coding
uagpf_v2_unigene28282 uagpf v2.0 406
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger partial 0.0
Putative N-terminus
uagpf_v2_unigene28295 uagpf v2.0 559
• AutoFact: Ubiquitin fusion degradaton protein, putative n=1 Tax=Ricinus communis RepID=B9STM3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ufd1 like protein 0.0
Internal
uagpf_v2_unigene28477 uagpf v2.0 350
• AutoFact: DUF659 multi-domain protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein loc100247282 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain