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Assembly Name: uagpf v2.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene11110 uagpf v2.0 1143
AutoFact: Quinone oxidoreductase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q8LDI4_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 2-alkenal reductase 0.0
C-terminus
uagpf_v2_unigene11257 uagpf v2.0 659
AutoFact: DUF659 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein loc100247282 0.0
Internal
uagpf_v2_unigene11267 uagpf v2.0 741
AutoFact: putative cell division control protein [Arabidopsis thaliana] 5.0e-29
Blast2go: cell division control protein 1.28344e-38
unknown
uagpf_v2_unigene11301 uagpf v2.0 695
AutoFact: XRCC4 homolog [Populus nigra] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair protein xrcc4 0.0
N-terminus
uagpf_v2_unigene11312 uagpf v2.0 413
AutoFact: Tonoplast intrinsic protein, putative n=1 Tax=Ricinus communis RepID=B9RS20_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mip tip subfamily 0.0
C-terminus
uagpf_v2_unigene11354 uagpf v2.0 219
AutoFact: Integrase n=1 Tax=Boechera divaricarpa RepID=B6REL8_9BRAS 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 3.63931e-15
Internal
uagpf_v2_unigene11445 uagpf v2.0 425
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna binding 3.45145e-40
Internal
uagpf_v2_unigene11558 uagpf v2.0 447
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
Blast2go: retrotransposon unclassified 0.0
unknown
uagpf_v2_unigene11693 uagpf v2.0 579
AutoFact: Cinnamoyl-CoA reductase n=2 Tax=Malvoideae RepID=D9ZKR8_9ROSI 0.0
FL-Next: tr=Cinnamoyl-CoA reductase; Pinus massoniana. 0.0
Blast2go: cinnamoyl reductase 0.0
C-terminus
uagpf_v2_unigene11808 uagpf v2.0 1797
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
C-terminus
uagpf_v2_unigene11837 uagpf v2.0 1431
AutoFact: tropine dehydrogenase [Arabidopsis thaliana] dbj|BAA98195.1| short chain alcohol dehydrogenase-like [Arabidopsis thaliana] gb|AAO22710.1| putative short chain alcohol dehydrogenase [Arabidopsis thaliana] gb|AAO42448.1| putative short chain alcohol dehydro 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tropinone reductase homolog at1g07440 0.0
Complete
uagpf_v2_unigene11860 uagpf v2.0 782
AutoFact: Prolyl 4-hydroxylase alpha subunit, putative n=1 Tax=Ricinus communis RepID=B9RSW4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: prolyl 4-hydroxylase alpha subunit-like protein 0.0
N-terminus
uagpf_v2_unigene12121 uagpf v2.0 599
AutoFact: Protein SEY1, putative n=1 Tax=Ricinus communis RepID=B9SN36_RICCO 0.0
Blast2go: protein root hair defective 3 homolog 1-like 0.0
unknown
uagpf_v2_unigene12266 uagpf v2.0 401
AutoFact: Argonaute/Zwille-like protein n=2 Tax=Picea RepID=Q4PLA9_PICGL 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: argonaute protein group 0.0
C-terminus
uagpf_v2_unigene12397 uagpf v2.0 570
AutoFact: Aquaporin-like protein n=1 Tax=Picea abies RepID=O65860_PICAB 0.0
FL-Next: tr=Aquaporin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: mip tip subfamily 0.0
C-terminus
uagpf_v2_unigene12651 uagpf v2.0 1479
AutoFact: Protein SEY1, putative n=1 Tax=Ricinus communis RepID=B9SN36_RICCO 0.0
FL-Next: sp=Protein ROOT HAIR DEFECTIVE 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein root hair defective 3 homolog 1-like 0.0
N-terminus
uagpf_v2_unigene12664 uagpf v2.0 634
AutoFact: TRAPPC10 domain containing protein 2.0e-27
Blast2go: protein club 0.0
unknown
uagpf_v2_unigene12750 uagpf v2.0 1473
AutoFact: Argonaute/Zwille-like protein n=2 Tax=Picea RepID=Q4PLA9_PICGL 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: protein argonaute 4 0.0
N-terminus
uagpf_v2_unigene12832 uagpf v2.0 898
AutoFact: DUF2045 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein cw7 0.0
C-terminus
uagpf_v2_unigene12888 uagpf v2.0 574
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SAD3_RICCO 0.0
Blast2go: dead box rna helicase 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain