Sustainpine_db
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Assembly Name: uagpf v2.0

Name: protein homodimerization activity

Term: GO:0042803  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene41280 uagpf v2.0 494
• AutoFact: tryptophan synthase beta chain [Arabidopsis thaliana] dbj|BAB10143.1| tryptophan synthase beta chain [Arabidopsis thaliana] gb|AAL91238.1| tryptophan synthase beta chain [Arabidopsis thaliana] gb|AAN15574.1| tryptophan synthase beta chain [Arabidopsis tha 0.0
• Blast2go: tryptophan synthase beta chain 0.0
Putative coding
uagpf_v2_unigene42343 uagpf v2.0 315
• AutoFact: [R] COG2319 FOG: WD40 repeat 3.0e-07
• FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
• Blast2go: wd repeat-containing 0.0
Internal
uagpf_v2_unigene42486 uagpf v2.0 216
• AutoFact: tryptophan synthase beta chain [Arabidopsis thaliana] dbj|BAB10143.1| tryptophan synthase beta chain [Arabidopsis thaliana] gb|AAL91238.1| tryptophan synthase beta chain [Arabidopsis thaliana] gb|AAN15574.1| tryptophan synthase beta chain [Arabidopsis tha 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tryptophan synthase beta chain 0.0
Internal
uagpf_v2_unigene44163 uagpf v2.0 274
• AutoFact: Histidine kinase 1 plant, putative n=1 Tax=Ricinus communis RepID=B9RNF2_RICCO 3.00004e-41
• FL-Next: sp=Histidine kinase CKI1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: histidine kinase 1 0.0
Internal
uagpf_v2_unigene44298 uagpf v2.0 352
• AutoFact: Malic enzyme n=1 Tax=Picea sitchensis RepID=B8LMR7_PICSI 0.0
• FL-Next: sp=Malic enzyme; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene44698 uagpf v2.0 319
• AutoFact: Malic enzyme n=1 Tax=Picea sitchensis RepID=B8LMR7_PICSI 0.0
• FL-Next: sp=Malic enzyme; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene45189 uagpf v2.0 285
• AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 3.0e-33
• Blast2go: homeobox-leucine zipper family protein 0.0
Coding
uagpf_v2_unigene45239 uagpf v2.0 358
• AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
• FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: phytochrome 0.0
Internal
uagpf_v2_unigene45575 uagpf v2.0 362
• AutoFact: quinolinate synthase [Arabidopsis thaliana] dbj|BAB09392.1| unnamed protein product [Arabidopsis thaliana] gb|AAK59620.1| unknown protein [Arabidopsis thaliana] gb|AAM44908.1| unknown protein [Arabidopsis thaliana] gb|AAM62776.1| unknown [Arabidopsis thal 0.0
• FL-Next: tr=Expressed protein; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene46797 uagpf v2.0 374
• AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
• FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: phytochrome o 0.0
Internal
uagpf_v2_unigene47153 uagpf v2.0 396
• AutoFact: PPR domain containing protein 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.4374e-17
Internal
uagpf_v2_unigene49158 uagpf v2.0 345
• AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 5.0e-12
• Blast2go: homeobox-leucine zipper family protein 0.0
unknown
uagpf_v2_unigene49250 uagpf v2.0 157
• AutoFact: DNA-binding protein PcMYB1, putative [Arabidopsis thaliana] 0.0
• Blast2go: telomere repeat binding factor 1 0.0
unknown
uagpf_v2_unigene49677 uagpf v2.0 523
• AutoFact: GrpE protein homolog n=1 Tax=Picea sitchensis RepID=A9NWL2_PICSI 0.0
• FL-Next: sp=GrpE protein homolog; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: grpe like protein 0.0
C-terminus
uagpf_v2_unigene49683 uagpf v2.0 532
• AutoFact: NAC domain-containing protein 78 [Arabidopsis thaliana] sp|Q84K00.2|NAC78_ARATH RecName: Full=NAC domain-containing protein 78; Short=ANAC078 emb|CAB85547.1| putative protein [Arabidopsis thaliana] gb|AAM20460.1| putative protein [Arabidopsis thaliana] gb 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nac domain ipr003441 0.0
C-terminus
uagpf_v2_unigene51212 uagpf v2.0 394
• AutoFact: Probable pyridoxal biosynthesis protein PDX1 n=2 Tax=Spermatophyta RepID=PDX1_GINBI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene51377 uagpf v2.0 461
• AutoFact: RecName: Full=Glycine-rich RNA-binding protein 10 emb|CAA78513.1| glycine-rich RNA binding protein [Brassica napus] 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: glycine-rich rna-binding protein 8 3.81263e-21
Putative N-terminus
uagpf_v2_unigene51665 uagpf v2.0 260
• AutoFact: Caprin-1_C multi-domain protein 6.0e-09
• Blast2go: zinc finger protein 1.05389e-34
unknown
uagpf_v2_unigene52503 uagpf v2.0 294
• AutoFact: DUF1421 multi-domain protein 9.0e-18
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: zinc finger protein 0.0
C-terminus
uagpf_v2_unigene53597 uagpf v2.0 427
• AutoFact: Protein arginine n-methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RT51_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone-arginine methyltransferase carm1 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain