|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
uagpf_v2_unigene11404
|
uagpf v2.0
|
617
|
|
• AutoFact: RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7 gb|AAA34005.1| RNA polymerase II [Glycine max] gb|ACU13766.1| unknown [Glycine max]
|
0.0
|
|
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida).
|
0.0
|
|
• Blast2go: dna-directed rna polymerase ii subunit rpb7
|
0.0
|
|
C-terminus
|
|
uagpf_v2_unigene11410
|
uagpf v2.0
|
525
|
|
• AutoFact: prephenate dehydratase [Ipomoea trifida] dbj|BAF37790.1| hypothetical protein [Ipomoea trifida]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
N-terminus
|
|
uagpf_v2_unigene11503
|
uagpf v2.0
|
903
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).
|
0.0
|
|
• Blast2go: protein rrp5 homolog
|
0.0
|
|
C-terminus
|
|
uagpf_v2_unigene11561
|
uagpf v2.0
|
479
|
|
• AutoFact: tRNA pseudouridine synthase family protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCD2_CUCME
|
0.0
|
|
• Blast2go: trna pseudouridine synthase
|
0.0
|
|
Putative coding
|
|
uagpf_v2_unigene11750
|
uagpf v2.0
|
540
|
|
• AutoFact: Exosome complex exonuclease rrp43, putative n=1 Tax=Ricinus communis RepID=B9T1F1_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: exosome complex component rrp43-like
|
0.0
|
|
N-terminus
|
|
uagpf_v2_unigene11788
|
uagpf v2.0
|
403
|
|
• AutoFact: RNA-binding KH domain-containing protein [Arabidopsis thaliana] gb|AAL32764.1| RNA-binding protein-like [Arabidopsis thaliana] gb|AAP37761.1| At5g53060 [Arabidopsis thaliana] gb|AED96298.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: kh domain-containing protein at4g18375-like
|
0.0
|
|
N-terminus
|
|
uagpf_v2_unigene12259
|
uagpf v2.0
|
697
|
|
• AutoFact: glycine-rich RNA-binding protein 3 [Arabidopsis thaliana] dbj|BAB10366.1| unnamed protein product [Arabidopsis thaliana] gb|AAL31194.1| AT5g61030/maf19_30 [Arabidopsis thaliana] gb|AAM78058.1| AT5g61030/maf19_30 [Arabidopsis thaliana] dbj|BAH30642.1| hypo
|
1.0e-32
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: glycine-rich rna-binding
|
0.0
|
|
C-terminus
|
|
uagpf_v2_unigene12432
|
uagpf v2.0
|
834
|
|
• AutoFact: 30S ribosomal protein S13 [Arabidopsis thaliana] sp|P42732.1|RR13_ARATH RecName: Full=30S ribosomal protein S13, chloroplastic; AltName: Full=CS13; Flags: Precursor emb|CAA79013.1| chloroplast 30S ribosomal protein S13 [Arabidopsis thaliana] emb|CAA88028.
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: 30s ribosomal protein s13
|
0.0
|
|
Complete
|
|
uagpf_v2_unigene12531
|
uagpf v2.0
|
707
|
|
• AutoFact: Ribosomal protein L7Ae-like [Arabidopsis thaliana]
|
1.0e-31
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
C-terminus
|
|
uagpf_v2_unigene12626
|
uagpf v2.0
|
532
|
|
• AutoFact: mRNA cap guanine-N7 methyltransferase n=1 Tax=Picea sitchensis RepID=C0PS33_PICSI
|
0.0
|
|
• Blast2go: mrna cap guanine-n7 methyltransferase 1
|
0.0
|
|
unknown
|
|
uagpf_v2_unigene12793
|
uagpf v2.0
|
589
|
|
• AutoFact: RNA-binding protein n=1 Tax=Nicotiana tabacum RepID=Q941H9_TOBAC
|
3.0e-36
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: glycine-rich rna-binding
|
0.0
|
|
N-terminus
|
|
uagpf_v2_unigene12866
|
uagpf v2.0
|
813
|
|
• AutoFact: exosome complex component RRP41 [Arabidopsis thaliana] ref|NP_001118878.1| exosome complex component RRP41 [Arabidopsis thaliana] gb|AAF04590.1|AF191741_1 exonuclease RRP41 [Arabidopsis thaliana] emb|CAB71092.1| exonuclease RRP41 [Arabidopsis thaliana] db
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: exosome complex component rrp41
|
0.0
|
|
C-terminus
|
|
uagpf_v2_unigene13112
|
uagpf v2.0
|
576
|
|
• AutoFact: glycine-rich RNA-binding protein-like [Arabidopsis thaliana]
|
7.0e-28
|
|
• Blast2go: glycine-rich rna-binding
|
1.32014e-36
|
|
unknown
|
|
uagpf_v2_unigene13147
|
uagpf v2.0
|
578
|
|
• AutoFact: glycine-rich RNA-binding protein 3 [Arabidopsis thaliana] dbj|BAB10366.1| unnamed protein product [Arabidopsis thaliana] gb|AAL31194.1| AT5g61030/maf19_30 [Arabidopsis thaliana] gb|AAM78058.1| AT5g61030/maf19_30 [Arabidopsis thaliana] dbj|BAH30642.1| hypo
|
1.0e-32
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: glycine-rich rna-binding
|
0.0
|
|
N-terminus
|
|
uagpf_v2_unigene13227
|
uagpf v2.0
|
452
|
|
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9T0X5_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dead-box atp-dependent rna helicase 29-like
|
0.0
|
|
Internal
|
|
uagpf_v2_unigene13277
|
uagpf v2.0
|
898
|
|
• AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=2 Tax=rosids RepID=B9R8U8_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: splicing factor u2af 38 kda subunit
|
0.0
|
|
C-terminus
|
|
uagpf_v2_unigene13522
|
uagpf v2.0
|
1021
|
|
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 9
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dead-box atp-dependent rna helicase 53-like
|
0.0
|
|
Internal
|
|
uagpf_v2_unigene13679
|
uagpf v2.0
|
659
|
|
• AutoFact: exoribonuclease-like [Oryza sativa Japonica Group] gb|EEC74235.1| hypothetical protein OsI_09429 [Oryza sativa Indica Group] gb|EEE58039.1| hypothetical protein OsJ_08863 [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: exosome complex component csl4
|
0.0
|
|
C-terminus
|
|
uagpf_v2_unigene13964
|
uagpf v2.0
|
518
|
|
• AutoFact: Ribonuclease n=1 Tax=Picea sitchensis RepID=D5AEE7_PICSI
|
0.0
|
|
• FL-Next: sp=Ribonuclease; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: ribonuclease h2 subunit a
|
0.0
|
|
C-terminus
|
|
uagpf_v2_unigene14028
|
uagpf v2.0
|
1221
|
|
• AutoFact: RNA recognition motif and CCHC-type zinc finger domain-containing protein [Arabidopsis thaliana] gb|AAL11606.1|AF424613_1 AT3g26420/F20C19_14 [Arabidopsis thaliana] dbj|BAB02203.1| unnamed protein product [Arabidopsis thaliana] gb|AAK96804.1| Unknown prot
|
7.0e-35
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: rna recognition motif family expressed
|
0.0
|
|
Putative C-terminus
|
