Sustainpine_db
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Assembly Name: uagpf v2.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene20398 uagpf v2.0 770
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
C-terminus
uagpf_v2_unigene20406 uagpf v2.0 537
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h2b 0.0
Complete
uagpf_v2_unigene20408 uagpf v2.0 612
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 4.00001e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
C-terminus
uagpf_v2_unigene20410 uagpf v2.0 714
AutoFact: Histone H2B.3 n=41 Tax=Spermatophyta RepID=H2B3_ARATH 4.99983e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
Complete
uagpf_v2_unigene20414 uagpf v2.0 709
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99965e-42
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h2b 0.0
C-terminus
uagpf_v2_unigene20419 uagpf v2.0 337
AutoFact: histone H4 [Hyacinthus orientalis] 3.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Putative Complete
uagpf_v2_unigene20421 uagpf v2.0 807
AutoFact: Histone H4 n=1 Tax=Camellia sinensis RepID=F4YF87_CAMSI 5.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
uagpf_v2_unigene20527 uagpf v2.0 659
AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin a-52 residue ribosomal protein fusion product 1 0.0
Complete
uagpf_v2_unigene25249 uagpf v2.0 407
AutoFact: histone H4 [Hyacinthus orientalis] 5.0e-38
Blast2go: histone h4 0.0
unknown
uagpf_v2_unigene25298 uagpf v2.0 589
AutoFact: Proliferating-cell nucleolar antigen p120, putative n=1 Tax=Ricinus communis RepID=B9S9W8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal rna methyltransferase nop2-like 0.0
N-terminus
uagpf_v2_unigene25383 uagpf v2.0 372
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9S0D0_RICCO 3.0e-27
FL-Next: tr=WD-repeat protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: wd repeat-containing protein 3-like 4.20189e-30
Putative C-terminus
uagpf_v2_unigene25952 uagpf v2.0 534
AutoFact: putative nuclear GTPase [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: guanine nucleotide-binding 3 homolog 0.0
Internal
uagpf_v2_unigene25960 uagpf v2.0 392
AutoFact: Pre-mRNA-processing factor 19 [Arabidopsis thaliana] sp|Q94BR4.1|PR19A_ARATH RecName: Full=Pre-mRNA-processing factor 19 homolog 1; AltName: Full=MOS4-associated complex protein 3A; Short=MAC protein 3A; AltName: Full=Plant U-box protein 59; AltName: Full 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-protein pub59 0.0
Internal
uagpf_v2_unigene25975 uagpf v2.0 479
AutoFact: Protein BCCIP homolog n=2 Tax=Arabidopsis RepID=BCCIP_ARATH 0.0
Blast2go: bccip-like protein 0.0
Coding
uagpf_v2_unigene26354 uagpf v2.0 519
AutoFact: Proliferating-cell nucleolar antigen p120, putative n=1 Tax=Ricinus communis RepID=B9S9W8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal rna methyltransferase nop2-like 0.0
Internal
uagpf_v2_unigene26434 uagpf v2.0 688
AutoFact: ribosome biogenesis regulatory protein-like protein [Arabidopsis thaliana] sp|Q9SH88.2|RRS1_ARATH RecName: Full=Ribosome biogenesis regulatory protein homolog dbj|BAE98464.1| hypothetical protein [Arabidopsis thaliana] gb|AEC09475.1| ribosome biogenesis r 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosome biogenesis regulatory protein 0.0
N-terminus
uagpf_v2_unigene26602 uagpf v2.0 256
AutoFact: enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Arabidopsis thaliana] sp|Q9ZPI5.1|MFP2_ARATH RecName: Full=Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2; Short=AtMPF2; Includes: RecName: Full=Enoyl-CoA hydratase/3-2-trans-enoyl-C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glyoxysomal fatty acid beta-oxidation multifunctional protein mfp-a 0.0
Internal
uagpf_v2_unigene26629 uagpf v2.0 354
AutoFact: lipoamide dehydrogenase 1 [Arabidopsis thaliana] gb|AEE75888.1| lipoamide dehydrogenase 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dihydrolipoyl dehydrogenase-like 0.0
Internal
uagpf_v2_unigene26820 uagpf v2.0 320
AutoFact: Plant adhesion molecule 1 n=3 Tax=Arabidopsis RepID=O81347_ARATH 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plant adhesion molecule 1 4.64108e-14
Internal
uagpf_v2_unigene27260 uagpf v2.0 549
AutoFact: replication factor C subunit 2/4 [Arabidopsis thaliana] gb|AAL07059.1| putative replication factor [Arabidopsis thaliana] gb|AAL32715.1| Similar replication factor C, 37-kDa subunit [Arabidopsis thaliana] gb|AAM61276.1| putative replication factor [Arabid 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication factor c subunit 2 4 9.12385e-42
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain