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Assembly Name: uagpf v2.0

Name: nucleotide binding

Term: GO:0000166  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene15025 uagpf v2.0 931
AutoFact: Pre-mRNA-processing factor 19 [Arabidopsis thaliana] sp|Q94BR4.1|PR19A_ARATH RecName: Full=Pre-mRNA-processing factor 19 homolog 1; AltName: Full=MOS4-associated complex protein 3A; Short=MAC protein 3A; AltName: Full=Plant U-box protein 59; AltName: Full 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-protein pub59 0.0
C-terminus
uagpf_v2_unigene15157 uagpf v2.0 597
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SKE9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heterogeneous nuclear ribonucleoprotein q 0.0
N-terminus
uagpf_v2_unigene15171 uagpf v2.0 768
AutoFact: Ribonucleic acid binding protein S1, putative n=1 Tax=Ricinus communis RepID=B9RI44_RICCO 2.00386e-43
Blast2go: ribonucleic acid binding protein 0.0
unknown
uagpf_v2_unigene15174 uagpf v2.0 835
AutoFact: RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana] gb|AEE75227.1| RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana] 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyadenylate-binding protein 2-a 0.0
C-terminus
uagpf_v2_unigene15200 uagpf v2.0 573
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] ref|NP_850516.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAL07141.1| unknown protein [Arabidopsis thaliana] gb|AAM83246.1| AT3g05090/T12H1_5 [Arabidopsis thalia 0.0
Blast2go: wd repeat-containing protein 48-like 0.0
Putative coding
uagpf_v2_unigene15294 uagpf v2.0 872
AutoFact: Os01g0367300 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q5JJM4_ORYSJ 7.0e-19
Blast2go: copper ion binding 3.29634e-21
Putative coding
uagpf_v2_unigene15339 uagpf v2.0 551
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) n=3 Tax=Vitis vinifera RepID=D7SM13_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding 0.0
Putative C-terminus
uagpf_v2_unigene15515 uagpf v2.0 625
AutoFact: peptide alpha-N-acetyltransferase [Arabidopsis thaliana] dbj|BAB10599.1| unnamed protein product [Arabidopsis thaliana] gb|AAK96745.1| Unknown protein [Arabidopsis thaliana] gb|AAL47392.1| unknown protein [Arabidopsis thaliana] gb|AAM64579.1| silencing gr 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: silencing group b protein 0.0
N-terminus
uagpf_v2_unigene15654 uagpf v2.0 736
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAC27402.2| expressed protein [Arabidopsis thaliana] gb|AAM65204.1| unknown [Arabidopsis thaliana] dbj|BAC42145.1| unknown protein [Arabidopsis thaliana] gb|AAO63858.1| putative G-protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing protein 55-like 0.0
C-terminus
uagpf_v2_unigene15680 uagpf v2.0 560
AutoFact: Flowering time control protein-like protein (Fragment) n=1 Tax=Picea sitchensis RepID=E0ZL31_PICSI 7.0e-11
Blast2go: flowering time control protein 2.21199e-12
unknown
uagpf_v2_unigene15694 uagpf v2.0 1984
AutoFact: putative arginine/serine-rich protein [Arabidopsis thaliana] 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein arginine serine-rich 45 0.0
Putative Complete
uagpf_v2_unigene15762 uagpf v2.0 597
AutoFact: Dynamin central region; Dynamin GTPase effector [Medicago truncatula] 7.00649e-45
Blast2go: dynamin-related protein 3a-like 0.0
unknown
uagpf_v2_unigene15782 uagpf v2.0 729
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SEZ1_RICCO 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein fpa 0.0
C-terminus
uagpf_v2_unigene15815 uagpf v2.0 695
AutoFact: translation initiation factor 3 subunit B [Arabidopsis thaliana] sp|Q9C5Z1.1|EIF3B_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3 p110; AltName: Full=p82 gb|AAG53615.1|AF2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 3 subunit b-like 0.0
C-terminus
uagpf_v2_unigene15980 uagpf v2.0 833
AutoFact: polypyrimidine tract-binding protein 2 [Arabidopsis thaliana] sp|Q9FGL9.1|PTBP2_ARATH RecName: Full=Polypyrimidine tract-binding protein homolog 2 dbj|BAB08421.1| polypyrimidine tract-binding RNA transport protein-like [Arabidopsis thaliana] gb|AAU90050.1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene16013 uagpf v2.0 720
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] ref|NP_001078546.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAB10005.1| WD-repeat protein-like [Arabidopsis thaliana] gb|AAK96726.1| WD-repeat protein-like [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing protein 26-like 0.0
C-terminus
uagpf_v2_unigene16243 uagpf v2.0 479
AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7SWB7_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glutamate-gated kainate-type ion channel receptor subunit 5 0.0
Putative Complete
uagpf_v2_unigene16338 uagpf v2.0 624
AutoFact: RNA recognition motif and CCHC-type zinc finger domain-containing protein [Arabidopsis thaliana] gb|AAL11606.1|AF424613_1 AT3g26420/F20C19_14 [Arabidopsis thaliana] dbj|BAB02203.1| unnamed protein product [Arabidopsis thaliana] gb|AAK96804.1| Unknown prot 7.0e-35
Blast2go: rna recognition motif family expressed 0.0
unknown
uagpf_v2_unigene16459 uagpf v2.0 652
AutoFact: U1 small nuclear ribonucleoprotein 70 kDa, putative n=1 Tax=Ricinus communis RepID=B9S6I9_RICCO 0.0
FL-Next: sp=U1 small nuclear ribonucleoprotein 70 kDa; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: u1 small nuclear ribonucleoprotein-70k 0.0
N-terminus
uagpf_v2_unigene16572 uagpf v2.0 691
AutoFact: Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Picea sitchensis RepID=A9NNT0_PICSI 0.0
FL-Next: sp=Eukaryotic translation initiation factor 3 subunit G; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: initiation factor 3g 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain