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Assembly Name: biogeco2 v2.0

Name: ATPase, AAA-type, core

Term: IPR003959  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene8456 biogeco2 v2.0 475
AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
FL-Next: sp=ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
N-terminus
biog2_v2.0_unigene8583 biogeco2 v2.0 750
AutoFact: Chaperone clpb, putative n=1 Tax=Ricinus communis RepID=B9SJA7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
N-terminus
biog2_v2.0_unigene8795 biogeco2 v2.0 392
AutoFact: Vacuolar protein sorting-associated protein VPS4, putative n=3 Tax=Spermatophyta RepID=B9SCR4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vacuolar sorting protein 4b 0.0
Putative N-terminus
biog2_v2.0_unigene8805 biogeco2 v2.0 486
AutoFact: 26S protease regulatory subunit 10B homolog A n=2 Tax=Arabidopsis RepID=PS10A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 26s protease regulatory subunit 0.0
N-terminus
biog2_v2.0_unigene8850 biogeco2 v2.0 528
AutoFact: oxidoreductase [Arabidopsis thaliana] ref|NP_001078177.1| oxidoreductase [Arabidopsis thaliana] gb|AAK62416.1|AF386971_1 Unknown protein [Arabidopsis thaliana] dbj|BAB02034.1| unnamed protein product [Arabidopsis thaliana] gb|AAP37844.1| At3g18210 [Arabid 0.0
FL-Next: sp=Uncharacterized PKHD-type hydroxylase At1g22950; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized pkhd-type hydroxylase at1g22950-like 0.0
C-terminus
biog2_v2.0_unigene9168 biogeco2 v2.0 424
AutoFact: Vacuolar protein sorting-associated protein VPS4, putative n=3 Tax=Spermatophyta RepID=B9SCR4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vacuolar sorting protein 4b 0.0
Internal
biog2_v2.0_unigene9397 biogeco2 v2.0 251
AutoFact: replication factor C subunit 3 [Arabidopsis thaliana] gb|AAG51681.1|AC010704_25 putative replication factor C; 24844-22715 [Arabidopsis thaliana] gb|AAL38893.1| putative replication factor C [Arabidopsis thaliana] gb|AAM51357.1| putative replication facto 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication factor c subunit 5-like 0.0
Internal
biog2_v2.0_unigene9425 biogeco2 v2.0 313
AutoFact: Vacuolar protein sorting-associated protein VPS4, putative n=3 Tax=Spermatophyta RepID=B9SCR4_RICCO 0.0
Blast2go: vacuolar sorting protein 4b 0.0
unknown
biog2_v2.0_unigene9538 biogeco2 v2.0 333
AutoFact: Vacuolar protein sorting factor 4B-like n=4 Tax=Poaceae RepID=Q5QMP6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: katanin p60 atpase-containing subunit a-like 2-like 0.0
Internal
biog2_v2.0_unigene9613 biogeco2 v2.0 297
AutoFact: RecName: Full=Pleiotropic drug resistance protein 2; AltName: Full=NpPDR2 emb|CAH40786.1| PDR-like ABC transporter [Nicotiana plumbaginifolia] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pleiotropic drug resistance protein 2-like 0.0
Internal
biog2_v2.0_unigene9663 biogeco2 v2.0 583
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RUJ7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 0.0
N-terminus
biog2_v2.0_unigene9790 biogeco2 v2.0 574
AutoFact: PREDICTED: similar to ftsH-like protease n=1 Tax=Vitis vinifera RepID=UPI0001982E96 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent zinc metalloprotease ftsh mitochondrial-like 0.0
N-terminus
biog2_v2.0_unigene9832 biogeco2 v2.0 341
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] dbj|BAF01763.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82177.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
biog2_v2.0_unigene10121 biogeco2 v2.0 383
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] gb|AED97923.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
Blast2go: aaa-type atpase family protein 0.0
unknown
biog2_v2.0_unigene10155 biogeco2 v2.0 411
AutoFact: katanin [Gossypium hirsutum] 0.0
FL-Next: sp=Katanin p60 ATPase-containing subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: katanin p60 atpase-containing subunit 0.0
Internal
biog2_v2.0_unigene10364 biogeco2 v2.0 549
AutoFact: FtsH extracellular protease [Arabidopsis thaliana] gb|AAB63626.1| cell division protein isolog [Arabidopsis thaliana] emb|CAB43894.1| cell division protein-like [Arabidopsis thaliana] emb|CAB81312.1| cell division protein-like [Arabidopsis thaliana] gb|AE 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: cell division protein 0.0
C-terminus
biog2_v2.0_unigene10632 biogeco2 v2.0 633
AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene10741 biogeco2 v2.0 373
AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
FL-Next: tr=ATP binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: fidgetin-like protein 1-like 0.0
Internal
biog2_v2.0_unigene10782 biogeco2 v2.0 658
AutoFact: DHHC-type zinc finger family protein [Arabidopsis thaliana] sp|Q8L5Y5.1|ZDH17_ARATH RecName: Full=Probable S-acyltransferase At4g15080; AltName: Full=Probable palmitoyltransferase At4g15080; AltName: Full=Zinc finger DHHC domain-containing protein At4g150 2.0e-07
FL-Next: sp=Probable S-acyltransferase At4g15080; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable s-acyltransferase at4g15080-like 4.62259e-09
N-terminus
biog2_v2.0_unigene10825 biogeco2 v2.0 315
AutoFact: Chaperone clpb, putative n=1 Tax=Ricinus communis RepID=B9RNX1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein mitochondrial-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain