Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: response to cold

Term: GO:0009409  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene9301 biogeco2 v2.0 364
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 9 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 53-like 0.0
Internal
biog2_v2.0_unigene9473 biogeco2 v2.0 382
AutoFact: Alcohol dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9SHB0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: quinone oxidoreductase-like protein chloroplastic-like 0.0
Internal
biog2_v2.0_unigene9621 biogeco2 v2.0 138
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 9 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 53-like 0.0
Internal
biog2_v2.0_unigene9639 biogeco2 v2.0 300
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine hydroxymethyltransferase 0.0
Internal
biog2_v2.0_unigene9807 biogeco2 v2.0 723
AutoFact: pfam01370, Epimerase, NAD dependent epimerase/dehydratase family 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Internal
biog2_v2.0_unigene10062 biogeco2 v2.0 227
AutoFact: ATP synthase delta chain, chloroplastic n=1 Tax=Spinacia oleracea RepID=ATPD_SPIOL 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
biog2_v2.0_unigene10326 biogeco2 v2.0 431
AutoFact: putative lactoylglutathione lyase, chloroplast [Arabidopsis thaliana] sp|Q8W593.1|LGUC_ARATH RecName: Full=Probable lactoylglutathione lyase, chloroplast; AltName: Full=Glyoxalase I; Flags: Precursor gb|AAL31884.1|AF419551_1 At1g67280/F1N21_10 [Arabidopsi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lactoylglutathione chloroplast-like 0.0
N-terminus
biog2_v2.0_unigene10529 biogeco2 v2.0 313
AutoFact: SKP1 interacting partner 4 [Arabidopsis thaliana] sp|Q9M2C9.1|SKIP4_ARATH RecName: Full=F-box/kelch-repeat protein SKIP4; AltName: Full=SKP1-interacting partner 4 emb|CAB71065.1| putative protein [Arabidopsis thaliana] gb|ABF18998.1| At3g61350 [Arabidopsi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene10574 biogeco2 v2.0 532
AutoFact: B-box type zinc finger-containing protein [Arabidopsis thaliana] gb|AAS77483.1| At5g54470 [Arabidopsis thaliana] dbj|BAD94801.1| putative protein [Arabidopsis thaliana] gb|AED96499.1| B-box type zinc finger-containing protein [Arabidopsis thaliana] 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene11343 biogeco2 v2.0 377
AutoFact: DEAD-box ATP-dependent RNA helicase 38 [Arabidopsis thaliana] sp|Q93ZG7.2|RH38_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 38; AltName: Full=Low expression of osmotically-responsive genes 4 protein; AltName: Full=Protein CRYOPHYTE emb|CAB64214 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 38-like 0.0
Internal
biog2_v2.0_unigene11648 biogeco2 v2.0 366
AutoFact: Glycosyltransferase, CAZy family GT2 n=5 Tax=rosids RepID=B9N113_POPTR 0.0
Blast2go: cellulose synthase-like protein 0.0
unknown
biog2_v2.0_unigene11795 biogeco2 v2.0 312
AutoFact: MIP-T3 multi-domain protein 8.0e-16
FL-Next: sp=Protein HIRA; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box-like wd repeat-containing protein tbl1xr1-like 0.0
Internal
biog2_v2.0_unigene12070 biogeco2 v2.0 219
AutoFact: ribophorin II (RPN2) family protein [Arabidopsis thaliana] ref|NP_001190785.1| ribophorin II (RPN2) family protein [Arabidopsis thaliana] gb|AAL24233.1| AT4g21150/F7J7_90 [Arabidopsis thaliana] gb|AAL79584.1| AT4g21150/F7J7_90 [Arabidopsis thaliana] gb|AE 0.0
FL-Next: tr=Ribophorin II family protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: ribophorin ii family protein 0.0
Internal
biog2_v2.0_unigene12123 biogeco2 v2.0 526
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SJG4_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter family of the mitochondria family 0.0
Internal
biog2_v2.0_unigene12132 biogeco2 v2.0 1667
AutoFact: S-adenosylmethionine synthase 3 n=6 Tax=Embryophyta RepID=METK3_ARATH 0.0
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: s-adenosylmethionine synthetase 0.0
Complete
biog2_v2.0_unigene12316 biogeco2 v2.0 315
AutoFact: Alcohol oxidase (Fragment) n=1 Tax=Glycine max RepID=C6F118_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: long-chain-alcohol oxidase fao1-like 0.0
Internal
biog2_v2.0_unigene12342 biogeco2 v2.0 325
AutoFact: putative pre-mRNA splicing factor [Oryza sativa Japonica Group] gb|AAP54456.1| U5 snRNP-associated 102 kDa protein, putative, expressed [Oryza sativa Japonica Group] gb|EAY79087.1| hypothetical protein OsI_34194 [Oryza sativa Indica Group] 0.0
FL-Next: tr=Pre-mRNA splicing factor, putative; Ricinus communis (Castor bean). 0.0
Blast2go: pre-mrna splicing factor 0.0
Internal
biog2_v2.0_unigene12482 biogeco2 v2.0 231
AutoFact: SAL1 phosphatase n=5 Tax=Brassicaceae RepID=DPNP1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3 (2 ) -bisphosphate nucleotidase 0.0
Internal
biog2_v2.0_unigene12515 biogeco2 v2.0 446
AutoFact: Protein kinase family protein n=2 Tax=Glycine max RepID=C6ZRY5_SOYBN 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable leucine-rich repeat receptor-like serine threonine-protein kinase at5g15730-like 8.9533e-14
C-terminus
biog2_v2.0_unigene12789 biogeco2 v2.0 279
AutoFact: WD-40 repeat family protein [Arabidopsis thaliana] dbj|BAB09017.1| unnamed protein product [Arabidopsis thaliana] gb|AAL15328.1| AT5g67320/K8K14_4 [Arabidopsis thaliana] gb|AAN28871.1| At5g67320/K8K14_4 [Arabidopsis thaliana] gb|AED98328.1| WD-40 repeat f 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain