Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: response to cold

Term: GO:0009409  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene5696 biogeco2 v2.0 586
AutoFact: Formate dehydrogenase n=1 Tax=Populus trichocarpa RepID=A9PEQ6_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: formate dehydrogenase 0.0
C-terminus
biog2_v2.0_unigene5867 biogeco2 v2.0 1176
AutoFact: calcium-dependent lipid-binding domain-containing protein [Arabidopsis thaliana] gb|AAL06551.1|AF412098_1 AT4g34150/F28A23_90 [Arabidopsis thaliana] gb|AAN31905.1| unknown protein [Arabidopsis thaliana] gb|AAT41866.1| At4g34150 [Arabidopsis thaliana] gb|A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 0.0
Complete
biog2_v2.0_unigene6048 biogeco2 v2.0 576
AutoFact: TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana] dbj|BAB01754.1| GloEL protein; chaperonin, 60 kDa [Arabidopsis thaliana] gb|AEE75362.1| TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: isco large subunit-binding protein subunit beta 0.0
Internal
biog2_v2.0_unigene6135 biogeco2 v2.0 1221
AutoFact: S-adenosylmethionine synthase 3 n=6 Tax=Embryophyta RepID=METK3_ARATH 0.0
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: s-adenosylmethionine synthetase 0.0
C-terminus
biog2_v2.0_unigene6226 biogeco2 v2.0 329
AutoFact: Rare cold inducible protein (Fragment) n=4 Tax=Pinaceae RepID=C6FC72_PSEMZ 4.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rare cold inducible protein 8.02543e-20
Complete
biog2_v2.0_unigene7010 biogeco2 v2.0 1143
AutoFact: Membrane acyl-CoA binding protein n=1 Tax=Agave americana RepID=Q4L0H4_AGAAM 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: acyl- binding protein 0.0
C-terminus
biog2_v2.0_unigene7352 biogeco2 v2.0 1893
AutoFact: Elongation factor 2 n=32 Tax=Magnoliophyta RepID=EF2_BETVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor ef-2 0.0
Complete
biog2_v2.0_unigene7366 biogeco2 v2.0 483
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 9 0.0
Blast2go: dead-box atp-dependent rna helicase 53-like 0.0
unknown
biog2_v2.0_unigene7675 biogeco2 v2.0 424
AutoFact: phosphoglyceromutase [Chlamydophila abortus S26/3] sp|Q5L4Y3.1|GPMA_CHLAB RecName: Full=2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Short=BPG-dependent PGAM; Short=PGAM; Short=Phosphoglyceromutase; Short=dPGM emb|CAH64312.1| putative phosph 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphoglycerate mutase 0.0
C-terminus
biog2_v2.0_unigene7894 biogeco2 v2.0 486
AutoFact: MIP-T3 multi-domain protein 8.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box-like wd repeat-containing protein tbl1xr1-like 0.0
Internal
biog2_v2.0_unigene8360 biogeco2 v2.0 396
AutoFact: Alcohol dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9SHB0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: quinone oxidoreductase-like protein chloroplastic-like 0.0
N-terminus
biog2_v2.0_unigene8361 biogeco2 v2.0 507
AutoFact: Bifunctional purine biosynthesis protein, putative n=1 Tax=Ricinus communis RepID=B9SXJ1_RICCO 0.0
FL-Next: tr=Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: bifunctional purine biosynthesis 0.0
Internal
biog2_v2.0_unigene8452 biogeco2 v2.0 525
AutoFact: 22 kDa polypeptide [Nicotiana tabacum] emb|CAB91553.1| DREPP4 protein [Nicotiana tabacum] 8.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plasma-membrane associated cation-binding protein 1 1.64501e-15
N-terminus
biog2_v2.0_unigene8579 biogeco2 v2.0 489
AutoFact: sulfite reductase [Nicotiana tabacum] dbj|BAA33796.1| sulfite reductase [Nicotiana tabacum] 0.0
FL-Next: sp=Ferredoxin--nitrite reductase, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: sulfite reductase 0.0
Internal
biog2_v2.0_unigene8652 biogeco2 v2.0 295
AutoFact: putative lactoylglutathione lyase, chloroplast [Arabidopsis thaliana] sp|Q8W593.1|LGUC_ARATH RecName: Full=Probable lactoylglutathione lyase, chloroplast; AltName: Full=Glyoxalase I; Flags: Precursor gb|AAL31884.1|AF419551_1 At1g67280/F1N21_10 [Arabidopsi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lactoylglutathione chloroplast-like 0.0
Internal
biog2_v2.0_unigene8688 biogeco2 v2.0 652
AutoFact: putative lactoylglutathione lyase, chloroplast [Arabidopsis thaliana] sp|Q8W593.1|LGUC_ARATH RecName: Full=Probable lactoylglutathione lyase, chloroplast; AltName: Full=Glyoxalase I; Flags: Precursor gb|AAL31884.1|AF419551_1 At1g67280/F1N21_10 [Arabidopsi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lactoylglutathione chloroplast-like 0.0
C-terminus
biog2_v2.0_unigene8949 biogeco2 v2.0 446
AutoFact: F-box protein 7 n=2 Tax=Arabidopsis RepID=SKI32_ARATH 0.0
Blast2go: f-box protein 0.0
unknown
biog2_v2.0_unigene8978 biogeco2 v2.0 921
AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Blast2go: ribulose bisphosphate small subunit 0.0
Complete
biog2_v2.0_unigene9050 biogeco2 v2.0 623
AutoFact: Alternative oxidase n=1 Tax=Picea sitchensis RepID=A9NRS5_PICSI 0.0
FL-Next: sp=Alternative oxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alternative oxidase 0.0
Putative C-terminus
biog2_v2.0_unigene9193 biogeco2 v2.0 268
AutoFact: ABC transporter family protein n=1 Tax=Camellia sinensis RepID=F5A834_CAMSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter family protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain