Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene17593 biogeco3 v1.0 349
AutoFact: Class III HD-Zip protein HDZ33 n=4 Tax=Pinaceae RepID=Q0Q419_PINTA 0.0
FL-Next: tr=Class III HD-Zip protein HDZ33; Pinus taeda (Loblolly pine). 0.0
Blast2go: homeodomain-leucine zipper trancription factor hb-3 0.0
Internal
biog3_v1.0_unigene17731 biogeco3 v1.0 236
AutoFact: GAGA-binding transcriptional activator BBR/BPC6-like n=1 Tax=Vitis vinifera RepID=B2Z458_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: basic pentacysteine 4 0.0
Internal
biog3_v1.0_unigene17740 biogeco3 v1.0 184
AutoFact: Phytochrome n=43 Tax=Spermatophyta RepID=PHY_PINSY 0.0
FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine). 0.0
Blast2go: phytochrome p 0.0
Internal
biog3_v1.0_unigene17748 biogeco3 v1.0 185
AutoFact: WRKY DNA-binding protein 21 [Arabidopsis thaliana] sp|O04336.1|WRK21_ARATH RecName: Full=Probable WRKY transcription factor 21; AltName: Full=WRKY DNA-binding protein 21 gb|AAK28441.1|AF272747_1 WRKY DNA-binding protein 21 [Arabidopsis thaliana] gb|AAB630 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wrky dna-binding protein 21 0.0
Internal
biog3_v1.0_unigene17898 biogeco3 v1.0 186
AutoFact: Tubby-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPK2_PHYPA 0.0
Blast2go: tubby-like f-box protein 3 0.0
unknown
biog3_v1.0_unigene18022 biogeco3 v1.0 277
AutoFact: Homeobox protein, putative n=1 Tax=Ricinus communis RepID=B9R943_RICCO 0.0
Blast2go: homeobox-leucine zipper protein hat5-like 0.0
unknown
biog3_v1.0_unigene18078 biogeco3 v1.0 167
AutoFact: Male-specific transcription factor M88B7.2 n=1 Tax=Marchantia polymorpha RepID=Q6J3Q5_MARPO 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene18123 biogeco3 v1.0 165
AutoFact: transcription factor DP1 [Populus tremula x Populus tremuloides] gb|AAP73785.1| DP1 [Populus tremula x Populus tremuloides] 0.0
Blast2go: transcription factor e2 dimerization partner protein 0.0
unknown
biog3_v1.0_unigene18124 biogeco3 v1.0 175
AutoFact: PHD finger and bromo-adjacent homology domain-containing protein [Arabidopsis thaliana] dbj|BAD95354.1| receptor like protein [Arabidopsis thaliana] gb|AEE84563.1| PHD finger and bromo-adjacent homology domain-containing protein [Arabidopsis thaliana] 0.0
Blast2go: ebs-bah-phd domain-containing protein 0.0
unknown
biog3_v1.0_unigene18390 biogeco3 v1.0 148
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: c2-h2 zinc finger protein 0.0
Internal
biog3_v1.0_unigene18501 biogeco3 v1.0 116
AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 9.0e-29
Blast2go: nuclear transcription factor y subunit a-9-like 0.0
unknown
biog3_v1.0_unigene18514 biogeco3 v1.0 203
AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RNX6_PHYPA 0.0
FL-Next: sp=DNA-directed RNA polymerase; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: dna-directed rna polymerase iii subunit rpc2 0.0
Internal
biog3_v1.0_unigene18530 biogeco3 v1.0 110
AutoFact: transcription factor DP1 [Populus tremula x Populus tremuloides] gb|AAP73785.1| DP1 [Populus tremula x Populus tremuloides] 0.0
Blast2go: transcription factor e2 dimerization partner protein 0.0
unknown
biog3_v1.0_unigene18661 biogeco3 v1.0 309
AutoFact: putative helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription-repair-coupling factor-like 0.0
Internal
biog3_v1.0_unigene18666 biogeco3 v1.0 141
AutoFact: small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana] ref|NP_849414.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana] ref|NP_001031682.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis 3.0e-30
Blast2go: small nuclear ribonucleoprotein associated protein b 8.18162e-41
unknown
biog3_v1.0_unigene18669 biogeco3 v1.0 275
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene18741 biogeco3 v1.0 130
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SRS4_RICCO 2.0e-39
Blast2go: protein 3.53968e-42
unknown
biog3_v1.0_unigene18841 biogeco3 v1.0 195
AutoFact: protein TWIN LOV 1 [Arabidopsis thaliana] dbj|BAB83170.1| twin LOV protein 1 [Arabidopsis thaliana] gb|AEC05613.1| protein TWIN LOV 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein twin lov 1 0.0
Internal
biog3_v1.0_unigene18987 biogeco3 v1.0 328
AutoFact: Tubby-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPK2_PHYPA 0.0
Blast2go: tubby-like f-box protein 3 0.0
unknown
biog3_v1.0_unigene19246 biogeco3 v1.0 323
AutoFact: transcription factor DP1 [Populus tremula x Populus tremuloides] gb|AAP73785.1| DP1 [Populus tremula x Populus tremuloides] 0.0
Blast2go: transcription factor e2 dimerization partner protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain