Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene14194 biogeco3 v1.0 390
AutoFact: Tubby-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPK2_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubby-like f-box protein 3 0.0
N-terminus
biog3_v1.0_unigene14209 biogeco3 v1.0 285
AutoFact: ZEITLUPE n=1 Tax=Mesembryanthemum crystallinum RepID=Q6UEI5_MESCR 0.0
FL-Next: sp=Adagio protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: adagio protein 1 0.0
Internal
biog3_v1.0_unigene14315 biogeco3 v1.0 199
AutoFact: Map3k delta-1 protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RZR2_RICCO 0.0
Blast2go: protein kinase 0.0
unknown
biog3_v1.0_unigene14418 biogeco3 v1.0 248
AutoFact: Ethylene transcription factor n=2 Tax=Fagus sylvatica RepID=Q70AB2_FAGSY 6.0e-19
Blast2go: ap2 domain containing protein 2.25605e-23
Coding
biog3_v1.0_unigene14437 biogeco3 v1.0 238
AutoFact: Type II CPD DNA photolyase n=1 Tax=Pityrogramma austroamericana RepID=Q6WS77_9MONI 0.0
FL-Next: Isoform 2 of Deoxyribodipyrimidine photo-lyase OS=Arabidopsis thaliana GN=PHR1 0.0
Blast2go: cpd photolyase 0.0
Internal
biog3_v1.0_unigene14603 biogeco3 v1.0 159
AutoFact: Phytochrome n=43 Tax=Spermatophyta RepID=PHY_PINSY 0.0
FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine). 0.0
Blast2go: phytochrome p 0.0
Internal
biog3_v1.0_unigene14620 biogeco3 v1.0 131
AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
Blast2go: high mobility group family 0.0
unknown
biog3_v1.0_unigene14713 biogeco3 v1.0 348
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RHR8_RICCO 0.0
Blast2go: enhancer of polycomb-like protein 0.0
unknown
biog3_v1.0_unigene14945 biogeco3 v1.0 222
AutoFact: Plastid sigma facor SIG2 n=2 Tax=Physcomitrella patens RepID=E1C9M6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna sigma 70 subfamily 0.0
Internal
biog3_v1.0_unigene14955 biogeco3 v1.0 621
AutoFact: transcription factor TCP4 [Arabidopsis thaliana] ref|NP_850589.1| transcription factor TCP4 [Arabidopsis thaliana] ref|NP_001189896.1| transcription factor TCP4 [Arabidopsis thaliana] sp|Q8LPR5.1|TCP4_ARATH RecName: Full=Transcription factor TCP4; AltName 9.0e-34
Blast2go: transcription factor tcp4 4.49701e-39
unknown
biog3_v1.0_unigene14997 biogeco3 v1.0 408
AutoFact: Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: leucine-rich repeat receptor-like protein kinase 0.0
Internal
biog3_v1.0_unigene15038 biogeco3 v1.0 298
AutoFact: AP2-related transcription factor AP2L3 (Fragment) n=2 Tax=Picea RepID=Q106U2_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: apetala2-like protein 0.0
Internal
biog3_v1.0_unigene15104 biogeco3 v1.0 330
AutoFact: Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL 0.0
Blast2go: leucine-rich repeat receptor-like protein kinase 0.0
unknown
biog3_v1.0_unigene15205 biogeco3 v1.0 401
AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein hdg2-like 0.0
Internal
biog3_v1.0_unigene15318 biogeco3 v1.0 332
AutoFact: type II homeodomain-leucine zipper protein [Medicago sativa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene15319 biogeco3 v1.0 324
AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein hdg2-like 0.0
Internal
biog3_v1.0_unigene15336 biogeco3 v1.0 379
AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna topoisomerase ii 0.0
Internal
biog3_v1.0_unigene15388 biogeco3 v1.0 382
AutoFact: Myb [Nicotiana tabacum] 7.0e-26
FL-Next: sp=Myb-related protein 3R-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: myb-related protein 3r-1-like 1.14511e-28
Internal
biog3_v1.0_unigene15434 biogeco3 v1.0 265
AutoFact: pfam05920, Homeobox_KN, Homeobox KN domain 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox protein knotted-1-like 3 0.0
Internal
biog3_v1.0_unigene15450 biogeco3 v1.0 244
AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 3.9937e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain