Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco3 v1.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene6029 biogeco3 v1.0 1352
• AutoFact: H/ACA ribonucleoprotein complex subunit 4 [Arabidopsis thaliana] sp|Q9LD90.1|DKC1_ARATH RecName: Full=H/ACA ribonucleoprotein complex subunit 4; AltName: Full=Nopp-140-associated protein of 57 kDa homolog; Short=AtNAP57; AltName: Full=Nucleolar protein NA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
biog3_v1.0_unigene6041 biogeco3 v1.0 2210
• AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein 0.0
C-terminus
biog3_v1.0_unigene6062 biogeco3 v1.0 722
• AutoFact: DUF579 domain containing protein 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein 0.0
Complete
biog3_v1.0_unigene6065 biogeco3 v1.0 986
• AutoFact: Protein HLJ1, putative n=1 Tax=Ricinus communis RepID=B9SEQ7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chaperone protein dnaj 49 0.0
C-terminus
biog3_v1.0_unigene6091 biogeco3 v1.0 1284
• AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=5 Tax=core eudicotyledons RepID=B9IJV9_POPTR 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Blast2go: abc transporter b family member 19-like 0.0
Putative C-terminus
biog3_v1.0_unigene6096 biogeco3 v1.0 469
• AutoFact: putative transcription factor [Oryza sativa Japonica Group] gb|ABF99747.1| acyl-CoA binding family protein, putative, expressed [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: acyl- binding protein 4 0.0
Internal
biog3_v1.0_unigene6109 biogeco3 v1.0 1040
• AutoFact: WD repeat-containing protein 61 [Arabidopsis thaliana] emb|CAB43658.1| putative protein [Arabidopsis thaliana] emb|CAB79741.1| putative protein [Arabidopsis thaliana] gb|AAP37692.1| At4g29830 [Arabidopsis thaliana] gb|AEE85683.1| WD repeat-containing prot 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene6111 biogeco3 v1.0 746
• AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin fusion protein 0.0
Complete
biog3_v1.0_unigene6123 biogeco3 v1.0 884
• AutoFact: small ubiquitin-related modifier 2 [Arabidopsis thaliana] sp|Q9FLP6.1|SUMO2_ARATH RecName: Full=Small ubiquitin-related modifier 2; Short=AtSUMO2 dbj|BAB08585.1| ubiquitin-like protein SMT3-like [Arabidopsis thaliana] gb|AAL91628.1| AT5g55160/MCO15_11 [Ar 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-like protein smt3 0.0
Complete
biog3_v1.0_unigene6141 biogeco3 v1.0 2030
• AutoFact: Shaggy-related protein kinase epsilon [Arabidopsis thaliana] sp|Q8VZD5.1|KSG5_ARATH RecName: Full=Shaggy-related protein kinase epsilon; AltName: Full=ASK-epsilon gb|AAL57679.1| AT5g14640/T15N1_130 [Arabidopsis thaliana] gb|AAQ65089.1| At5g14640/T15N1_130 0.0
• FL-Next: sp=Shaggy-related protein kinase epsilon; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Complete
biog3_v1.0_unigene6145 biogeco3 v1.0 1079
• AutoFact: chloroplast inner envelope protein, 110 kD (IEP110) [Pisum sativum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene6159 biogeco3 v1.0 3187
• AutoFact: coatomer subunit beta-1 [Arabidopsis thaliana] ref|NP_001190880.1| coatomer subunit beta-1 [Arabidopsis thaliana] sp|Q9SV21.2|COPB1_ARATH RecName: Full=Coatomer subunit beta-1; AltName: Full=Beta-coat protein 1; Short=Beta-COP 1 gb|AEE85918.1| coatomer su 0.0
• FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: coatomer subunit beta-1 0.0
Putative Complete
biog3_v1.0_unigene6163 biogeco3 v1.0 488
• AutoFact: BTB multi-domain protein 5.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative N-terminus
biog3_v1.0_unigene6189 biogeco3 v1.0 490
• AutoFact: Isoform 2 of Lon protease homolog, mitochondrial n=2 Tax=Oryza sativa RepID=Q69UZ3-2 0.0
• FL-Next: Isoform 2 of Lon protease homolog, mitochondrial OS=Oryza sativa subsp. japonica GN=Os07g0689300 0.0
• Blast2go: lon protease homolog mitochondrial-like 0.0
Internal
biog3_v1.0_unigene6195 biogeco3 v1.0 705
• AutoFact: Leucine-rich repeat transmembrane protein kinase n=1 Tax=Glycine max RepID=C6ZRZ8_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probably inactive leucine-rich repeat receptor-like protein kinase at3g28040-like 0.0
Internal
biog3_v1.0_unigene6199 biogeco3 v1.0 468
• AutoFact: Ku70 homolog [Populus nigra] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp-dependent dna helicase 2 subunit ku70 0.0
Internal
biog3_v1.0_unigene6213 biogeco3 v1.0 1402
• AutoFact: Elongation factor Tu n=3 Tax=Spermatophyta RepID=A9NWL9_PICSI 0.0
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: elongation factor chloroplastic-like 0.0
C-terminus
biog3_v1.0_unigene6225 biogeco3 v1.0 602
• AutoFact: amyloid beta precursor protein binding protein 1 [Arabidopsis thaliana] sp|P42744.1|ULA1_ARATH RecName: Full=NEDD8-activating enzyme E1 regulatory subunit; AltName: Full=Auxin-resistance protein AXR1 gb|AAB59348.1| ubiquitin-activating enzyme E1 [Arabidop 0.0
• FL-Next: sp=NEDD8-activating enzyme E1 regulatory subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: nedd8-activating enzyme e1 regulatory subunit 0.0
Internal
biog3_v1.0_unigene6243 biogeco3 v1.0 715
• AutoFact: BTF3b-like transcription factor [Musa acuminata] 5.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
biog3_v1.0_unigene6252 biogeco3 v1.0 817
• AutoFact: Aldehyde dehydrogenase (Fragment) n=2 Tax=Vitis vinifera RepID=D7SP43_VITVI 0.0
• FL-Next: sp=Aldehyde dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: aldehyde dehydrogenase family 3 member f1-like 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain