Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene3624 biogeco3 v1.0 797
AutoFact: replication licensing factor MCM7 homologue [Zea mays] emb|CAC44902.1| replication licensing factor MCM7 homologue [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein prolifera 0.0
Complete
biog3_v1.0_unigene3631 biogeco3 v1.0 241
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S925_RICCO 0.0
FL-Next: sp=Probable S-acyltransferase At1g69420; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable s-acyltransferase at1g69420-like 0.0
Internal
biog3_v1.0_unigene3654 biogeco3 v1.0 790
AutoFact: Rab2/RabB-family small GTPase n=4 Tax=Physcomitrella patens subsp. patens RepID=A9SC62_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab2 -family small gtpase 0.0
Putative C-terminus
biog3_v1.0_unigene3670 biogeco3 v1.0 331
AutoFact: Transferrin, putative n=1 Tax=Ricinus communis RepID=B9T880_RICCO 0.0
FL-Next: tr=Transferrin, putative; Ricinus communis (Castor bean). 0.0
Blast2go: achain human serum transferrin 0.0
Putative N-terminus
biog3_v1.0_unigene3778 biogeco3 v1.0 463
AutoFact: nudix hydrolase 3 [Arabidopsis thaliana] sp|Q8L831.1|NUDT3_ARATH RecName: Full=Nudix hydrolase 3; Short=AtNUDT3 gb|AAM53332.1| unknown protein [Arabidopsis thaliana] gb|AAN15461.1| unknown protein [Arabidopsis thaliana] gb|AEE36287.1| nudix hydrolase 3 [A 0.0
FL-Next: sp=Nudix hydrolase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nudix hydrolase 3-like 0.0
Internal
biog3_v1.0_unigene3780 biogeco3 v1.0 889
AutoFact: RecName: Full=Cysteine protease ATG4B; AltName: Full=Autophagy-related protein 4 homolog B; Short=Protein autophagy 4; AltName: Full=OsAtg4 0.0
FL-Next: sp=Cysteine protease ATG4A; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: cysteine protease atg4-like 0.0
C-terminus
biog3_v1.0_unigene3782 biogeco3 v1.0 499
AutoFact: Nucleopor_Nup85 domain containing protein 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene3801 biogeco3 v1.0 557
AutoFact: Receptor-like kinase (Fragment) n=1 Tax=Marchantia polymorpha RepID=A7VM26_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene3832 biogeco3 v1.0 280
AutoFact: RecName: Full=Endoribonuclease Dicer homolog 4; AltName: Full=Dicer-like protein 4; Short=OsDCL4; AltName: Full=Protein SHOOT ORGANIZATION 1 gb|ABS32306.1| dicer-like protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dicer-like protein 4 0.0
Internal
biog3_v1.0_unigene3856 biogeco3 v1.0 460
AutoFact: peroxisomal targeting signal 1 receptor [Nicotiana tabacum] 0.0
FL-Next: sp=Peroxisome biogenesis protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: peroxisome biogenesis protein 5-like 0.0
Internal
biog3_v1.0_unigene3879 biogeco3 v1.0 715
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
biog3_v1.0_unigene3887 biogeco3 v1.0 387
AutoFact: [A] COG5186 Poly(A) polymerase 0.0
Blast2go: poly polymerase 0.0
unknown
biog3_v1.0_unigene3933 biogeco3 v1.0 242
AutoFact: Histone deacetylase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TSU0_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
Putative C-terminus
biog3_v1.0_unigene3970 biogeco3 v1.0 372
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein OSJNBa0064G16.1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: suppressor of auxin resistance1 protein 0.0
C-terminus
biog3_v1.0_unigene3983 biogeco3 v1.0 544
AutoFact: F-box/LRR-repeat protein 15 [Arabidopsis thaliana] sp|Q9SMY8.2|FBL15_ARATH RecName: Full=F-box/LRR-repeat protein 15 gb|AEE86191.1| F-box/LRR-repeat protein 15 [Arabidopsis thaliana] 0.0
FL-Next: sp=F-box/LRR-repeat protein 15; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene3995 biogeco3 v1.0 667
AutoFact: Isoform 2 of Lon protease homolog, mitochondrial n=2 Tax=Oryza sativa RepID=Q69UZ3-2 0.0
FL-Next: sp=Lon protease homolog 1, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: lon protease homolog mitochondrial-like 0.0
Internal
biog3_v1.0_unigene3997 biogeco3 v1.0 443
AutoFact: Predicted protein n=11 Tax=Physcomitrella patens RepID=A9S6L2_PHYPA 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene4004 biogeco3 v1.0 1987
AutoFact: Pre-mRNA-processing factor 19 [Arabidopsis thaliana] sp|Q94BR4.1|PR19A_ARATH RecName: Full=Pre-mRNA-processing factor 19 homolog 1; AltName: Full=MOS4-associated complex protein 3A; Short=MAC protein 3A; AltName: Full=Plant U-box protein 59; AltName: Full 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-protein pub59 0.0
Complete
biog3_v1.0_unigene4038 biogeco3 v1.0 1399
AutoFact: pfam05920, Homeobox_KN, Homeobox KN domain 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox protein knotted-1-like 3 0.0
C-terminus
biog3_v1.0_unigene4052 biogeco3 v1.0 823
AutoFact: Ferredoxin-1, chloroplastic n=1 Tax=Mesembryanthemum crystallinum RepID=FER1_MESCR 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferrodoxin precursor 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain