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Assembly Name: Solea senegalensis v4.1 (global assembly)

Name: actin, cytoplasmic 2

Source: Ref_annotation from RefSeq

Species: Danio rerio

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
solea_v4.1_unigene228680 Solea senegalensis v4.1 (global assembly) 779
• FL-Next: tr=B-actin; Pagrus major (Red sea bream) (Chrysophrys major). 3.0e-39
• AutoFact: [Z] COG5277 Actin and related proteins 3.0e-32
N-terminus
solea_v4.1_unigene253899 Solea senegalensis v4.1 (global assembly) 312
• FL-Next: tr=Uncharacterized protein; nigroviridis). 1.0e-20
• Sma3: Zgc:86725 5.836e-06
• AutoFact: Actin, spherule isoform n=1 Tax=Physarum polycephalum RepID=ACTD_PHYPO 1.0e-15
Internal
solea_v4.1_unigene279974 Solea senegalensis v4.1 (global assembly) 879
• AutoFact: Beta actin (Fragment) n=6 Tax=Bilateria RepID=A8CLI4_OCHCU 2.0e-24
unknown
solea_v4.1_unigene279976 Solea senegalensis v4.1 (global assembly) 715
• FL-Next: tr=Uncharacterized protein; Latimeria chalumnae (West Indian ocean coelacanth). 6.0e-20
• Sma3: Beta-acitn 5.624e-06
• AutoFact: Beta actin (Fragment) n=6 Tax=Bilateria RepID=A8CLI4_OCHCU 4.0e-22
Internal
solea_v4.1_unigene282254 Solea senegalensis v4.1 (global assembly) 328
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 1.0e-36
• Sma3: Cytoskeletal beta actin 3.668e-10
• AutoFact: Tyrosine-protein kinase transforming protein Fgr n=2 Tax=Feline sarcoma virus RepID=FGR_FSVGR 8.0e-33
Putative N-terminus
solea_v4.1_unigene291109 Solea senegalensis v4.1 (global assembly) 627
• FL-Next: tr=Beta actin-1; Rachycentron canadum (cobia). 2.0e-18
• Sma3: Zgc:86725 9.019e-06
• AutoFact: Actin n=1 Tax=Elaeis oleifera RepID=Q94ET5_ELAOL 4.0e-15
Internal
solea_v4.1_unigene324034 Solea senegalensis v4.1 (global assembly) 1250
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 8.0e-16
• AutoFact: Actin-2 (Fragment) n=1 Tax=Naegleria fowleri RepID=ACT2_NAEFO 2.0e-35
Putative C-terminus
solea_v4.1_unigene325221 Solea senegalensis v4.1 (global assembly) 256
• FL-Next: tr=Uncharacterized protein; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes). 8.0e-10
• AutoFact: Beta-actin (Fragment) n=1 Tax=Channa punctata RepID=F2YRP1_9PERC 4.0e-11
Internal
solea_v4.1_unigene413081 Solea senegalensis v4.1 (global assembly) 2025
• FL-Next: tr=Beta actin-1; Rachycentron canadum (cobia). 3.0e-24
• AutoFact: PREDICTED: similar to actin n=1 Tax=Ciona intestinalis RepID=UPI000180C11A 5.0e-22
Putative C-terminus
solea_v4.1_unigene413083 Solea senegalensis v4.1 (global assembly) 3110
• FL-Next: sp=Actin, cytoplasmic 1; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes). 0.0
• AutoFact: Actin (Fragment) n=1 Tax=Enchytraeus japonensis RepID=B6RNM7_9ANNE 0.0
Putative N-terminus
solea_v4.1_unigene415787 Solea senegalensis v4.1 (global assembly) 130
• FL-Next: tr=Alpha actin; Ictalurus punctatus (Channel catfish). 1.0e-14
• Sma3: Zgc:86725 6.366e-06
• AutoFact: Conventional actin n=1 Tax=Naegleria gruberi RepID=D2VUS6_NAEGR 2.0e-11
Internal
solea_v4.1_unigene429485 Solea senegalensis v4.1 (global assembly) 348
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 6.0e-25
• Sma3: Cytoskeletal beta actin 3.833e-10
• AutoFact: Tyrosine-protein kinase transforming protein Fgr n=2 Tax=Feline sarcoma virus RepID=FGR_FSVGR 7.0e-29
Putative N-terminus
solea_v4.1_unigene429705 Solea senegalensis v4.1 (global assembly) 277
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 4.0e-23
• AutoFact: [Z] COG5277 Actin and related proteins 5.0e-17
Putative N-terminus
solea_v4.1_unigene584099 Solea senegalensis v4.1 (global assembly) 928
• FL-Next: sp=Actin, cytoplasmic 1; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes). 0.0
• Sma3: Zgc:123289 9.868e-06
• AutoFact: Actin (Fragment) n=1 Tax=Holcolaetis sp. CJV-2008 RepID=B2YGD8_9ARAC 2.0e-39
Putative C-terminus
solea_v4.1_unigene617712 Solea senegalensis v4.1 (global assembly) 199
• FL-Next: tr=Zgc:123289; Danio rerio (Zebrafish) (Brachydanio rerio). 2.0e-10
• AutoFact: [Z] COG5277 Actin and related proteins 9.0e-11
N-terminus
solea_v4.1_unigene630222 Solea senegalensis v4.1 (global assembly) 976
• FL-Next: tr=Uncharacterized protein; Gasterosteus aculeatus (Three-spined stickleback). 0.0
• AutoFact: Actin, cytoplasmic 2 n=1303 Tax=Eukaryota RepID=ACTG_HUMAN 0.0
N-terminus
solea_v4.1_unigene640625 Solea senegalensis v4.1 (global assembly) 790
• FL-Next: tr=B-actin; Pagrus major (Red sea bream) (Chrysophrys major). 0.0
• AutoFact: Actin (Fragment) n=2 Tax=Eukaryota RepID=Q002K8_9EUKA 0.0
Internal
solea_v4.1_unigene667766 Solea senegalensis v4.1 (global assembly) 649
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: B-actin 0.0
• AutoFact: Actin, cytoplasmic 2 n=1303 Tax=Eukaryota RepID=ACTG_HUMAN 0.0
Internal
solea_v4.1_unigene669922 Solea senegalensis v4.1 (global assembly) 497
• FL-Next: tr=B-actin; Pagrus major (Red sea bream) (Chrysophrys major). 9.80909e-45
• AutoFact: PREDICTED: similar to actin, alpha 1, skeletal muscle n=1 Tax=Ciona intestinalis RepID=UPI000180BF4B 0.0
N-terminus
solea_v4.1_unigene684650 Solea senegalensis v4.1 (global assembly) 360
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 9.0e-31
• AutoFact: Actin, cytoplasmic 2 n=1303 Tax=Eukaryota RepID=ACTG_HUMAN 0.0
Internal

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain