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Assembly Name: Solea senegalensis v4.1 (global assembly)

Name: Ku70/Ku80 beta-barrel domain

Term: IPR006164  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
solea_v4.1_unigene17053 Solea senegalensis v4.1 (global assembly) 2717
FL-Next: tr=ATP-dependent DNA helicase 2 subunit 1; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
Sma3: ATP-dependent DNA helicase 2 subunit 1 3.663e-14
AutoFact: ATP-dependent DNA helicase 2 subunit 1 n=1 Tax=Dicentrarchus labrax RepID=E6ZGL6_DICLA 0.0
Putative Complete
solea_v4.1_unigene22755 Solea senegalensis v4.1 (global assembly) 2850
FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
Sma3: Uncharacterized protein 0.0
AutoFact: ATP-dependent DNA helicase 2 subunit 1 n=1 Tax=Dicentrarchus labrax RepID=E6ZGL6_DICLA 0.0
Complete
solea_v4.1_unigene32846 Solea senegalensis v4.1 (global assembly) 598
FL-Next: tr=Uncharacterized protein; Gasterosteus aculeatus (Three-spined stickleback). 0.0
AutoFact: Xrcc5 protein n=7 Tax=Danio rerio RepID=A4FUM7_DANRE 0.0
N-terminus
solea_v4.1_unigene72171 Solea senegalensis v4.1 (global assembly) 362
FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 2.0e-20
AutoFact: xrcc5, xrcc5-a; X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining); K10885 ATP-dependent DNA helicase 2 subunit 2 9.0e-15
Internal
solea_v4.1_unigene72498 Solea senegalensis v4.1 (global assembly) 411
FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 3.0e-27
Sma3: ATP-dependent DNA helicase 2 subunit 1 1.55e-14
AutoFact: ATP-dependent DNA helicase 2 subunit 1 n=1 Tax=Dicentrarchus labrax RepID=E6ZGL6_DICLA 2.0e-21
Internal
solea_v4.1_unigene443024 Solea senegalensis v4.1 (global assembly) 436
FL-Next: tr=ATP-dependent DNA helicase 2 subunit 1; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
Sma3: ATP-dependent DNA helicase 2 subunit 1 2.198e-14
AutoFact: ATP-dependent DNA helicase 2 subunit 1 n=1 Tax=Dicentrarchus labrax RepID=E6ZGL6_DICLA 0.0
N-terminus
solea_v4.1_unigene510885 Solea senegalensis v4.1 (global assembly) 1748
FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
Sma3: ATP-dependent DNA helicase 2 subunit 1 3.663e-14
AutoFact: ATP-dependent DNA helicase 2 subunit 1 n=1 Tax=Dicentrarchus labrax RepID=E6ZGL6_DICLA 0.0
Putative N-terminus
solea_v4.1_unigene536819 Solea senegalensis v4.1 (global assembly) 1958
FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
Sma3: ATP-dependent DNA helicase 2 subunit 1 3.663e-14
AutoFact: ATP-dependent DNA helicase 2 subunit 1 n=1 Tax=Dicentrarchus labrax RepID=E6ZGL6_DICLA 0.0
Putative Complete
solea_v4.1_unigene596002 Solea senegalensis v4.1 (global assembly) 566
FL-Next: tr=Uncharacterized protein; Oryzias latipes (Medaka fish) (Japanese ricefish). 0.0
AutoFact: pfam02735, Ku, Ku70/Ku80 beta-barrel domain 2.0e-09
Internal
solea_v4.1_unigene694267 Solea senegalensis v4.1 (global assembly) 509
FL-Next: tr=Uncharacterized protein; Gasterosteus aculeatus (Three-spined stickleback). 9.0e-14
AutoFact: XRCC5; X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining); K10885 ATP-dependent DNA helicase 2 subunit 2 3.0e-08
N-terminus
solea_v4.1_unigene30133_split_0 Solea senegalensis v4.1 (global assembly) 2439
FL-Next: tr=Uncharacterized protein; Oryzias latipes (Medaka fish) (Japanese ricefish). 0.0
Sma3: Uncharacterized protein 0.0
AutoFact: xrcc5, Ku80, im:7137560, si:ch211-239d11.4; X-ray repair complementing defective repair in Chinese hamster cells 5; K10885 ATP-dependent DNA helicase 2 subunit 2 0.0
Putative N-terminus
solea_v4.1_unigene504082_split_0 Solea senegalensis v4.1 (global assembly) 441
FL-Next: tr=Uncharacterized protein; Oryzias latipes (Medaka fish) (Japanese ricefish). 0.0
AutoFact: pfam08785, Ku_PK_bind, Ku C terminal domain like 0.0
Internal
solea_v4.1_unigene74485_split_0 Solea senegalensis v4.1 (global assembly) 1287
FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
AutoFact: pfam08785, Ku_PK_bind, Ku C terminal domain like 0.0
Internal

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain