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Assembly Name: Solea senegalensis v4.1 (global assembly)

Name: Paraneoplastic encephalomyelitis antigen

Term: IPR002343  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
solea_v4.1_unigene184 Solea senegalensis v4.1 (global assembly) 3760
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 7.0e-07
Putative C-terminus
solea_v4.1_unigene507 Solea senegalensis v4.1 (global assembly) 1993
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Uncharacterized protein 0.0
• AutoFact: ELAV-like (Fragment) n=1 Tax=Oreochromis mossambicus RepID=Q1KN70_OREMO 0.0
Putative Complete
solea_v4.1_unigene3404 Solea senegalensis v4.1 (global assembly) 3023
• FL-Next: tr=Uncharacterized protein; Oryzias latipes (Medaka fish) (Japanese ricefish). 0.0
• Sma3: Ribonucleoprotein 2.549e-20
• AutoFact: ELAV-like protein 2 n=4 Tax=Euteleostomi RepID=ELAV2_XENLA 0.0
Putative Complete
solea_v4.1_unigene3516 Solea senegalensis v4.1 (global assembly) 1540
• FL-Next: tr=Uncharacterized protein; Oryzias latipes (Medaka fish) (Japanese ricefish). 0.0
• Sma3: ELAV-like protein 1 3.753e-16
• AutoFact: ELAV (Embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D) n=16 Tax=Euteleostomi RepID=A2A9S3_MOUSE 0.0
Putative C-terminus
solea_v4.1_unigene4132 Solea senegalensis v4.1 (global assembly) 3561
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Uncharacterized protein 0.0
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 2.0e-30
Putative Complete
solea_v4.1_unigene4743 Solea senegalensis v4.1 (global assembly) 2121
• FL-Next: tr=Elavl3 protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Uncharacterized protein 0.0
• AutoFact: ZHuC n=2 Tax=Euteleostomi RepID=P79736_DANRE 0.0
Complete
solea_v4.1_unigene6367 Solea senegalensis v4.1 (global assembly) 476
• FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Uncharacterized protein 9.331e-12
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 2.0e-15
N-terminus
solea_v4.1_unigene6591 Solea senegalensis v4.1 (global assembly) 4034
• FL-Next: tr=Uncharacterized protein; Oryzias latipes (Medaka fish) (Japanese ricefish). 0.0
• Sma3: Uncharacterized protein 0.0
• AutoFact: ELAV-like protein 2 n=4 Tax=Euteleostomi RepID=ELAV2_XENLA 0.0
Complete
solea_v4.1_unigene6622 Solea senegalensis v4.1 (global assembly) 1040
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: CUGBP Elav-like family member 2 1.716e-07
• AutoFact: Isoform 4 of CUGBP Elav-like family member 2 n=2 Tax=Danio rerio RepID=Q6P0B1-4 0.0
Putative C-terminus
solea_v4.1_unigene7815 Solea senegalensis v4.1 (global assembly) 1068
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: CUGBP Elav-like family member 2 1.655e-13
• AutoFact: CUGBP Elav-like family member 2 n=24 Tax=Euteleostomi RepID=CELF2_DANRE 0.0
N-terminus
solea_v4.1_unigene13832 Solea senegalensis v4.1 (global assembly) 1412
• FL-Next: tr=Uncharacterized protein; Gasterosteus aculeatus (Three-spined stickleback). 0.0
• Sma3: ELAV-like protein 1 4.39e-25
• AutoFact: ELAV-like protein 1 n=2 Tax=Salmo salar RepID=B5X1D5_SALSA 0.0
Putative Complete
solea_v4.1_unigene15566 Solea senegalensis v4.1 (global assembly) 678
• FL-Next: tr=ELAV-like protein 1; Osmerus mordax (Rainbow smelt) (Atherina mordax). 1.0e-38
• Sma3: ELAV-like protein 1 2.88e-25
• AutoFact: HUR protein n=3 Tax=Tetraodontidae RepID=Q6DB99_TETNG 6.0e-22
N-terminus
solea_v4.1_unigene27580 Solea senegalensis v4.1 (global assembly) 1434
• FL-Next: tr=ELAV-like protein 1; Salmo salar (Atlantic salmon). 0.0
• Sma3: Uncharacterized protein 0.0
• AutoFact: HUR protein n=3 Tax=Tetraodontidae RepID=Q6DB99_TETNG 0.0
Complete
solea_v4.1_unigene30635 Solea senegalensis v4.1 (global assembly) 1608
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: CUGBP Elav-like family member 2 1.626e-13
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 9.0e-11
Putative N-terminus
solea_v4.1_unigene33415 Solea senegalensis v4.1 (global assembly) 935
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: CUGBP Elav-like family member 2 1.299e-13
• AutoFact: Isoform 4 of CUGBP Elav-like family member 2 n=2 Tax=Danio rerio RepID=Q6P0B1-4 0.0
Putative N-terminus
solea_v4.1_unigene36707 Solea senegalensis v4.1 (global assembly) 1864
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Uncharacterized protein 0.0
• AutoFact: ELAV-like (Fragment) n=1 Tax=Oreochromis mossambicus RepID=Q1KN70_OREMO 0.0
Putative Complete
solea_v4.1_unigene37150 Solea senegalensis v4.1 (global assembly) 1281
• FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: ELAV-like protein 1 3.654e-16
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 2.0e-17
N-terminus
solea_v4.1_unigene37682 Solea senegalensis v4.1 (global assembly) 2684
• FL-Next: tr=Uncharacterized protein; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes). 0.0
• Sma3: Chromosome 1 SCAF14640, whole genome shotgun sequence 1.017e-11
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 9.0e-11
Putative Complete
solea_v4.1_unigene38028 Solea senegalensis v4.1 (global assembly) 1660
• FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Uncharacterized protein 0.0
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 4.0e-32
Complete
solea_v4.1_unigene44621 Solea senegalensis v4.1 (global assembly) 1864
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Uncharacterized protein 0.0
• AutoFact: ELAV-like (Fragment) n=1 Tax=Oreochromis mossambicus RepID=Q1KN70_OREMO 0.0
Putative Complete

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain