Logo_sudoe_cb Cabecera_solea2 Img_right
HomeAssembliesBLASTSearchInstitutions

Assembly Name: Solea senegalensis v4.1 (global assembly)

Name: Rho protein signal transduction

Term: GO:0007266  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
solea_v4.1_unigene93 Solea senegalensis v4.1 (global assembly) 4067
• FL-Next: tr=Collagen type I alpha 1; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Collagen type I alpha 2 2.668e-16
• AutoFact: Type 1 collagen alpha 1 n=1 Tax=Paralichthys olivaceus RepID=Q5NT96_PAROL 0.0
Putative C-terminus
solea_v4.1_unigene94 Solea senegalensis v4.1 (global assembly) 4067
• FL-Next: tr=Collagen type I alpha 1; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Collagen type I alpha 2 2.731e-16
• AutoFact: Type 1 collagen alpha 1 n=1 Tax=Paralichthys olivaceus RepID=Q5NT96_PAROL 0.0
Putative C-terminus
solea_v4.1_unigene99 Solea senegalensis v4.1 (global assembly) 6140
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Collagen type I alpha 2 3.272e-16
• AutoFact: Type 1 collagen alpha 2 n=1 Tax=Paralichthys olivaceus RepID=Q5NT95_PAROL 0.0
Putative Complete
solea_v4.1_unigene395 Solea senegalensis v4.1 (global assembly) 2011
• FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Rho-related GTP-binding protein RhoG 1.301e-11
• AutoFact: PREDICTED: ras-related C3 botulinum toxin substrate 3-like n=1 Tax=Anolis carolinensis RepID=UPI0002038A08 0.0
Putative Complete
solea_v4.1_unigene654 Solea senegalensis v4.1 (global assembly) 2117
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 2.0e-39
• AutoFact: Guanine nucleotide-binding protein subunit alpha-13 n=1 Tax=Dicentrarchus labrax RepID=E6ZHU5_DICLA 2.0e-32
Putative C-terminus
solea_v4.1_unigene2121 Solea senegalensis v4.1 (global assembly) 9215
• FL-Next: tr=Uncharacterized protein; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes). 0.0
• Sma3: Myosin IIIA 7.17e-08
• AutoFact: [Z] COG5022 Myosin heavy chain 0.0
Putative C-terminus
solea_v4.1_unigene2369 Solea senegalensis v4.1 (global assembly) 5924
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Collagen type I alpha 2 1.418e-16
• AutoFact: Col5a2; collagen, type V, alpha 2; K06236 collagen, type I/II/III/V/XI, alpha 0.0
Putative Complete
solea_v4.1_unigene2765 Solea senegalensis v4.1 (global assembly) 1990
• FL-Next: sp=Collagen alpha-1(I) chain; Cynops pyrrhogaster (Japanese common newt). 1.0e-22
• Sma3: Collagen type I alpha 2 1.914e-16
Internal
solea_v4.1_unigene3035 Solea senegalensis v4.1 (global assembly) 3075
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Uncharacterized protein 0.0
• AutoFact: Guanine nucleotide-binding protein subunit alpha-13 n=1 Tax=Dicentrarchus labrax RepID=E6ZHU5_DICLA 0.0
Complete
solea_v4.1_unigene3144 Solea senegalensis v4.1 (global assembly) 1232
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Uncharacterized protein 1.569e-12
• AutoFact: phactr2, si:ch211-8a9.4, zC8A9.4; phosphatase and actin regulator 2 7.0e-32
N-terminus
solea_v4.1_unigene3704 Solea senegalensis v4.1 (global assembly) 6153
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Collagen type I alpha 2 2.695e-16
• AutoFact: col5a2l, COL5A2, im:7038599, si:by143e18.1, si:dz167c3.3, wu:fa13f03, wu:fa98d01, wu:fj05e03; collagen, type V, alpha 2-like; K06236 collagen, type I/II/III/V/XI, alpha 0.0
Putative Complete
solea_v4.1_unigene4065 Solea senegalensis v4.1 (global assembly) 3154
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Myosin IIIA 1.284e-07
• AutoFact: [Z] COG5022 Myosin heavy chain 0.0
N-terminus
solea_v4.1_unigene4577 Solea senegalensis v4.1 (global assembly) 5855
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• AutoFact: [Z] COG5022 Myosin heavy chain 0.0
Putative Complete
solea_v4.1_unigene5888 Solea senegalensis v4.1 (global assembly) 9377
• FL-Next: tr=Chromosome 9 SCAF14710, whole genome shotgun sequence; nigroviridis). 0.0
• Sma3: Novel protein similar to human EGF LAG seven-pass G-type receptor 1 cadherin (CELSR1) 6.596e-08
• AutoFact: 7tm_2 multi-domain protein 0.0
Putative C-terminus
solea_v4.1_unigene9905 Solea senegalensis v4.1 (global assembly) 418
• FL-Next: tr=Uncharacterized protein; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes). 7.0e-21
• Sma3: Rho GDP-dissociation inhibitor 1 2.076e-14
• AutoFact: rho GDP-dissociation inhibitor 1-like; K12462 Rho GDP-dissociation inhibitor 6.0e-16
N-terminus
solea_v4.1_unigene11116 Solea senegalensis v4.1 (global assembly) 3223
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: CDC42 effector protein (Rho GTPase binding) 4 2.384e-10
• AutoFact: CDC42 effector protein (Rho GTPase binding) 4 n=1 Tax=Danio rerio RepID=Q6GMK1_DANRE 0.0
Putative Complete
solea_v4.1_unigene11171 Solea senegalensis v4.1 (global assembly) 928
• FL-Next: tr=Ras-related C3 botulinum toxin substrate 2; Esox lucius (Northern pike). 0.0
• Sma3: Rho-related GTP-binding protein RhoG 1.774e-11
• AutoFact: Ras-related C3 botulinum toxin substrate 1 n=28 Tax=Euteleostomi RepID=RAC1_HUMAN 0.0
N-terminus
solea_v4.1_unigene15247 Solea senegalensis v4.1 (global assembly) 1497
• FL-Next: tr=Uncharacterized protein; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes). 0.0
• Sma3: Collagen type I alpha 2 1.754e-16
• AutoFact: Type 1 collagen alpha 1 n=1 Tax=Paralichthys olivaceus RepID=Q5NT96_PAROL 0.0
Putative C-terminus
solea_v4.1_unigene15579 Solea senegalensis v4.1 (global assembly) 6127
• FL-Next: tr=Cadherin EGF LAG seven-pass G-type receptor 2; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Novel protein similar to human EGF LAG seven-pass G-type receptor 1 cadherin (CELSR1) 2.494e-12
• AutoFact: celsr2, si:rp71-11b17.9; cadherin, EGF LAG seven-pass G-type receptor 2; K04601 cadherin EGF LAG seven-pass G-type receptor 2 (flamingo) 0.0
Putative C-terminus
solea_v4.1_unigene16214 Solea senegalensis v4.1 (global assembly) 4558
• FL-Next: tr=Cadherin EGF LAG seven-pass G-type receptor 2; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• AutoFact: celsr2, si:rp71-11b17.9; cadherin, EGF LAG seven-pass G-type receptor 2; K04601 cadherin EGF LAG seven-pass G-type receptor 2 (flamingo) 0.0
N-terminus

Go to Annotations List

Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain