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Assembly Name: Solea senegalensis v4.1 (global assembly)

Name: fin development

Term: GO:0033333  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
solea_v4.1_unigene93 Solea senegalensis v4.1 (global assembly) 4067
• FL-Next: tr=Collagen type I alpha 1; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Collagen type I alpha 2 2.668e-16
• AutoFact: Type 1 collagen alpha 1 n=1 Tax=Paralichthys olivaceus RepID=Q5NT96_PAROL 0.0
Putative C-terminus
solea_v4.1_unigene94 Solea senegalensis v4.1 (global assembly) 4067
• FL-Next: tr=Collagen type I alpha 1; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Collagen type I alpha 2 2.731e-16
• AutoFact: Type 1 collagen alpha 1 n=1 Tax=Paralichthys olivaceus RepID=Q5NT96_PAROL 0.0
Putative C-terminus
solea_v4.1_unigene99 Solea senegalensis v4.1 (global assembly) 6140
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Collagen type I alpha 2 3.272e-16
• AutoFact: Type 1 collagen alpha 2 n=1 Tax=Paralichthys olivaceus RepID=Q5NT95_PAROL 0.0
Putative Complete
solea_v4.1_unigene2369 Solea senegalensis v4.1 (global assembly) 5924
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Collagen type I alpha 2 1.418e-16
• AutoFact: Col5a2; collagen, type V, alpha 2; K06236 collagen, type I/II/III/V/XI, alpha 0.0
Putative Complete
solea_v4.1_unigene2442 Solea senegalensis v4.1 (global assembly) 3549
• FL-Next: tr=Uncharacterized protein; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes). 0.0
• Sma3: Uncharacterized protein 8.577e-21
• AutoFact: col6a1; collagen, type VI, alpha 1; K06238 collagen, type VI, alpha 0.0
Putative C-terminus
solea_v4.1_unigene2765 Solea senegalensis v4.1 (global assembly) 1990
• FL-Next: sp=Collagen alpha-1(I) chain; Cynops pyrrhogaster (Japanese common newt). 1.0e-22
• Sma3: Collagen type I alpha 2 1.914e-16
Internal
solea_v4.1_unigene3704 Solea senegalensis v4.1 (global assembly) 6153
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Collagen type I alpha 2 2.695e-16
• AutoFact: col5a2l, COL5A2, im:7038599, si:by143e18.1, si:dz167c3.3, wu:fa13f03, wu:fa98d01, wu:fj05e03; collagen, type V, alpha 2-like; K06236 collagen, type I/II/III/V/XI, alpha 0.0
Putative Complete
solea_v4.1_unigene13162 Solea senegalensis v4.1 (global assembly) 1780
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Uncharacterized protein 0.0
• AutoFact: Rapunzel n=2 Tax=Danio rerio RepID=B9VEN0_DANRE 0.0
Complete
solea_v4.1_unigene21912 Solea senegalensis v4.1 (global assembly) 5430
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Uncharacterized protein 2.022e-16
• AutoFact: col12a1; collagen, type XII, alpha 1 0.0
Putative C-terminus
solea_v4.1_unigene24385 Solea senegalensis v4.1 (global assembly) 1804
• FL-Next: tr=Collagen alpha-1XIII chain; Salmo salar (Atlantic salmon). 4.0e-31
• Sma3: Uncharacterized protein 3.025e-19
• AutoFact: COL13A1; collagen, type XIII, alpha 1 1.99965e-42
Putative C-terminus
solea_v4.1_unigene27473 Solea senegalensis v4.1 (global assembly) 6350
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Collagen type I alpha 2 3.671e-16
• AutoFact: Collagen, type I, alpha 2 n=5 Tax=Cyprinidae RepID=Q6IQX2_DANRE 0.0
Putative Complete
solea_v4.1_unigene27535 Solea senegalensis v4.1 (global assembly) 5652
• FL-Next: tr=Uncharacterized protein; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
• Sma3: Collagen type I alpha 2 1.134e-16
• AutoFact: COL2A1; collagen, type II, alpha 1; K06236 collagen, type I/II/III/V/XI, alpha 0.0
Putative C-terminus
solea_v4.1_unigene30144 Solea senegalensis v4.1 (global assembly) 3796
• FL-Next: tr=Uncharacterized protein; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes). 0.0
• Sma3: Uncharacterized protein 2.861e-17
• AutoFact: Atrophin-1 multi-domain protein 1.0e-19
Putative C-terminus
solea_v4.1_unigene30875 Solea senegalensis v4.1 (global assembly) 6972
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Collagen type I alpha 2 1.921e-16
• AutoFact: col5a2l, COL5A2, im:7038599, si:by143e18.1, si:dz167c3.3, wu:fa13f03, wu:fa98d01, wu:fj05e03; collagen, type V, alpha 2-like; K06236 collagen, type I/II/III/V/XI, alpha 0.0
Putative C-terminus
solea_v4.1_unigene31116 Solea senegalensis v4.1 (global assembly) 3722
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Zgc:175106 protein 4.35e-06
• AutoFact: Zgc:175106 protein n=1 Tax=Danio rerio RepID=A9JRX1_DANRE 0.0
Complete
solea_v4.1_unigene31117 Solea senegalensis v4.1 (global assembly) 3265
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Zgc:175106 protein 4.35e-06
• AutoFact: Zgc:175106 protein n=1 Tax=Danio rerio RepID=A9JRX1_DANRE 0.0
Complete
solea_v4.1_unigene31140 Solea senegalensis v4.1 (global assembly) 3264
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Uncharacterized protein 1.961e-19
• AutoFact: collagen alpha-2(IX) chain-like 2.00386e-43
Complete
solea_v4.1_unigene35522 Solea senegalensis v4.1 (global assembly) 2308
• Sma3: Uncharacterized protein 2.384e-20
• AutoFact: COL27A1, FLJ11895, KIAA1870, MGC11337; collagen, type XXVII, alpha 1 0.0
Coding
solea_v4.1_unigene36728 Solea senegalensis v4.1 (global assembly) 6900
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 1.0e-24
• Sma3: Collagen type I alpha 2 2.668e-16
• AutoFact: col5a2l, COL5A2, im:7038599, si:by143e18.1, si:dz167c3.3, wu:fa13f03, wu:fa98d01, wu:fj05e03; collagen, type V, alpha 2-like; K06236 collagen, type I/II/III/V/XI, alpha 0.0
Putative C-terminus
solea_v4.1_unigene36782 Solea senegalensis v4.1 (global assembly) 4437
• FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
• Sma3: Uncharacterized protein 0.0
• AutoFact: bmp1a; bone morphogenetic protein 1a; K05502 bone morphogenetic protein 1 [EC:3.4.24.19] 0.0
Complete

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain