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Assembly Name: Solea senegalensis v4.1 (global assembly)

Name: Zinc finger, LIM-type

Term: IPR001781  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
solea_v4.1_unigene11 Solea senegalensis v4.1 (global assembly) 2373
FL-Next: tr=Protein-methionine sulfoxide oxidase mical3a; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Protein-methionine sulfoxide oxidase mical3b 6.817e-14
AutoFact: Novel protein (Fragment) n=3 Tax=Danio rerio RepID=A3KPN7_DANRE 1.0e-34
Putative C-terminus
solea_v4.1_unigene69 Solea senegalensis v4.1 (global assembly) 2450
FL-Next: tr=Uncharacterized protein; Oryzias latipes (Medaka fish) (Japanese ricefish). 0.0
Sma3: Uncharacterized protein 1.588e-07
AutoFact: LIM domain binding 3b n=1 Tax=Danio rerio RepID=Q802V0_DANRE 0.0
Putative Complete
solea_v4.1_unigene539 Solea senegalensis v4.1 (global assembly) 570
FL-Next: tr=Uncharacterized protein; Oryzias latipes (Medaka fish) (Japanese ricefish). 6.0e-15
AutoFact: Unassigned protein
Internal
solea_v4.1_unigene848 Solea senegalensis v4.1 (global assembly) 597
FL-Next: tr=Uncharacterized protein; Gasterosteus aculeatus (Three-spined stickleback). 0.0
AutoFact: novel protein similar to human microtubule associated monoxygenase, calponin and LIM domain containing 2 (MICAL2) 1.0e-24
Internal
solea_v4.1_unigene937 Solea senegalensis v4.1 (global assembly) 492
FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
Sma3: Uncharacterized protein 4.695e-08
AutoFact: similar to KIAA0843 protein; K07520 actin-binding LIM protein 4.0e-24
Internal
solea_v4.1_unigene2112 Solea senegalensis v4.1 (global assembly) 3634
FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 2.0e-39
AutoFact: PREDICTED: LIM and senescent cell antigen-like-containing domain protein 1-like n=3 Tax=Amniota RepID=UPI00020AE6FB 3.0e-39
Putative Complete
solea_v4.1_unigene2113 Solea senegalensis v4.1 (global assembly) 3273
FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
Sma3: Uncharacterized protein 0.0
AutoFact: lims1, wu:fc32c03, zgc:112533; LIM and senescent cell antigen-like domains 1 0.0
Putative Complete
solea_v4.1_unigene2250 Solea senegalensis v4.1 (global assembly) 2494
FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 3.0e-17
Sma3: PDZ and LIM domain protein 7 4.815e-20
AutoFact: Enigma-prov protein n=1 Tax=Xenopus laevis RepID=Q7SYW5_XENLA 2.0e-19
Putative Complete
solea_v4.1_unigene2431 Solea senegalensis v4.1 (global assembly) 2271
FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
Sma3: Uncharacterized protein 0.0
AutoFact: pxn, wu:fw71f12; paxillin; K05760 paxillin 0.0
Complete
solea_v4.1_unigene2693 Solea senegalensis v4.1 (global assembly) 4002
FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 2.0e-19
Sma3: Uncharacterized protein 0.0
Putative Complete
solea_v4.1_unigene3164 Solea senegalensis v4.1 (global assembly) 3650
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Uncharacterized protein 3.642e-08
AutoFact: novel protein similar to H.sapiens LMO6, LIM domain only 6 (LMO6) 0.0
Complete
solea_v4.1_unigene3174 Solea senegalensis v4.1 (global assembly) 1765
FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
Sma3: PDZ and LIM domain protein 2 7.817e-10
AutoFact: PDZ and LIM domain protein 2 n=2 Tax=Salmo salar RepID=B5X0W6_SALSA 0.0
Putative C-terminus
solea_v4.1_unigene3502 Solea senegalensis v4.1 (global assembly) 1411
FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
Sma3: PDZ and LIM domain protein 3 3.103e-20
AutoFact: PDZ and LIM domain protein 3 n=2 Tax=Salmo salar RepID=B5X616_SALSA 0.0
Complete
solea_v4.1_unigene3503 Solea senegalensis v4.1 (global assembly) 1849
FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
Sma3: Uncharacterized protein 0.0
AutoFact: PDZ and LIM domain protein 3 n=2 Tax=Salmo salar RepID=B5X616_SALSA 0.0
Complete
solea_v4.1_unigene3510 Solea senegalensis v4.1 (global assembly) 2542
FL-Next: tr=Uncharacterized protein; Gasterosteus aculeatus (Three-spined stickleback). 1.0e-31
AutoFact: lmo7a, id:ibd5155, si:dkey-57a22.10, wu:fc03h03; LIM domain only 7a; K06084 F-box protein 20 0.0
Internal
solea_v4.1_unigene3888 Solea senegalensis v4.1 (global assembly) 1246
FL-Next: tr=FHL2 isoform c variant 1; Sparus aurata (Gilthead sea bream). 0.0
Sma3: FHL2 isoform c variant 1 0.0
AutoFact: FHL2; four and a half LIM domains 2 0.0
Complete
solea_v4.1_unigene4048 Solea senegalensis v4.1 (global assembly) 633
FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 1.0e-18
AutoFact: Unassigned protein
N-terminus
solea_v4.1_unigene4049 Solea senegalensis v4.1 (global assembly) 2529
FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
AutoFact: wu:fa28a10; zgc:154176 0.0
Putative Complete
solea_v4.1_unigene4258 Solea senegalensis v4.1 (global assembly) 1143
FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
Sma3: Uncharacterized protein 0.0
AutoFact: lhx8a, cb875, fk78g12, lhx7, lhx8, wu:fk78g12; LIM homeobox 8a; K09375 LIM homeobox protein 6/8 0.0
Complete
solea_v4.1_unigene4264 Solea senegalensis v4.1 (global assembly) 8435
FL-Next: tr=Uncharacterized protein; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica). 0.0
Sma3: Uncharacterized protein 0.0
AutoFact: mical3; flavoprotein oxidoreductase MICAL3 0.0
Putative Complete

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain