SustainPineDB

Assembly Name: uma v2.0

UniGene Name: uma_v2.0_unigene10482

Length: 1553 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene uma_v2.0_unigene10482 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene853	51/51

Source	Descriptions	Term	Type	Identity
AutoFact	Beta-fructofuranosidase, soluble isoenzyme I n=1 Tax=Daucus carota RepID=INVB_DAUCA	-	-	64%
FL-Next	sp=Beta-fructofuranosidase, soluble isoenzyme I; Daucus carota (Carrot).	-	-	60%
Blast2go	vacuolar invertase	-	-	77%

Source	ECs	Term	Type	e value	Identity
Blast2go	Beta-fructofuranosidase.	EC:3.2.1.26	-	0.0	77%

Source	KEGGs	Term	Identity
Blast2go	Galactose metabolism	00052	77%
Blast2go	Starch and sucrose metabolism	00500	77%
Blast2go	Metabolic pathways	01100	77%

Source	GOs	Term	Type	e value	Identity
Blast2go	metabolic process	GO:0008152	Biological Process	0.0	77%
Blast2go	beta-fructofuranosidase activity	GO:0004564	Molecular Function	0.0	77%

Source	InterPros	Term	Type	Identity
Sma3	Aminotransferase, class V/Cysteine desulfurase	IPR000192	-	-
Sma3	Glycoside hydrolase, family 32	IPR001362	-	-
Sma3	Histone H4	IPR001951	-	-
Sma3	Glycosyl hydrolases family 32, N-terminal	IPR013148	-	-
Sma3	Glycosyl hydrolase family 32, C-terminal	IPR013189	-	-
Sma3	ABC transporter, conserved site	IPR017871	-	-
Sma3	Glycoside hydrolase, family 32, active site	IPR018053	-	-
Sma3	Peptidase S26A, signal peptidase I, conserved site	IPR019758	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: sp_plants

Fln subject: P80065

Fln msg: your sequence is shorter than subject: 429 - 661

Fln protein: ASDPLLQKWVKSEANPVIVPPEGIGLTDFRDPTTGWIGEDGAWRITIGSKLEMTGVALIFKTEDFVKYEEENILHSVNDTGMWECVDFYPVAASGVSGLDTSAVGVGVKHVLKASFDDDKHDYYAIGTYNVTSQKFIPDDPEMDVGLGLRYDYGKYYASKSFYDPVKERRILWGWIGETDSEQDDLRKGWASLQTIPRHIWFDNKTKTNIIQWPVEEIDELRSAAVVVENVLLQPGSVVEVNTTEAAQLDIELVIEFPEDTAAIDAAEDNALYNCSTSGGAAGRGVLGPFGLLVIAEKNLTEHTAVYFYVVKSANGKLQTFFCHDELRSSLATDLILGVHGSSVPVLANESISVRTLVDHSIVESYAQGGRRCITSRVYPTQALDGAAKLFLFNNATTAVKVQSLNVWQMESVFLRPYQQLEEEHSVV*

Protein Length: 430

Fln nts: GCCTCCGATCCGCTTCTCCAGAAATGGGTGAAATCGGAGGCGAATCCTGTCATAGTCCCGCCCGAGGGCATAGGGCTCACGGATTTCAGGGATCCGACCACAGGCTGGATCGGCGAAGACGGAGCCTGGCGGATTACAATCGGATCGAAGCTCGAGATGACGGGCGTGGCACTGATTTTCAAGACGGAGGACTTCGTCAAGTATGAAGAAGAGAATATTTTGCATTCTGTTAACGACACTGGCATGTGGGAGTGCGTGGATTTCTATCCCGTGGCCGCCTCTGGAGTGTCGGGTTTGGACACATCTGCGGTTGGAGTAGGCGTTAAGCATGTGCTCAAAGCTAGCTTCGATGACGATAAGCATGATTATTACGCCATTGGAACTTACAATGTCACGAGCCAGAAATTTATCCCCGACGACCCTGAAATGGACGTCGGGCTGGGGCTGCGGTATGATTATGGAAAATATTATGCTTCCAAGTCTTTTTACGATCCAGTGAAGGAGAGAAGAATTCTTTGGGGATGGATAGGAGAAACTGACAGCGAGCAGGACGATCTTAGAAAAGGATGGGCTTCTTTGCAGACGATTCCTAGGCATATTTGGTTTGATAACAAGACGAAGACCAATATTATCCAATGGCCCGTCGAAGAAATTGACGAGCTGCGATCGGCTGCGGTTGTCGTCGAGAATGTTCTGCTCCAGCCGGGCTCTGTTGTGGAAGTCAATACAACCGAGGCTGCTCAGTTGGATATTGAGCTCGTTATTGAATTCCCTGAGGACACCGCTGCCATCGACGCGGCCGAAGATAATGCACTCTACAACTGCAGTACTAGCGGAGGGGCTGCCGGTAGAGGCGTGCTGGGACCGTTTGGGTTGCTGGTTATAGCTGAGAAAAATCTGACGGAACATACTGCCGTTTATTTCTATGTCGTGAAATCTGCTAACGGCAAATTGCAGACCTTCTTCTGCCATGATGAGTTGAGGTCCTCTCTGGCGACTGATCTCATCCTGGGAGTCCACGGGAGCTCCGTCCCGGTTCTTGCAAACGAAAGCATCTCGGTTCGAACCCTGGTCGACCATTCTATTGTGGAGAGCTATGCTCAGGGTGGGAGGCGGTGCATAACCTCTAGGGTGTATCCGACACAGGCTCTCGATGGTGCTGCTAAACTGTTTCTGTTCAACAACGCCACTACAGCAGTGAAAGTCCAGAGTCTGAATGTATGGCAGATGGAGAGTGTGTTCCTGCGTCCTTACCAGCAACTTGAAGAGGAGCATTCGGTGGTCTAA___ACGGTGGGTGGTCGTGTGATTGATCCCCGGGGTGTGTCTGTGTCTTGTTTGGCTTGTAATAAAGCCGGACTGGATTGAGGAATTTATTATTTGATTGTGATGTGAAAGAGTGTGGTCTGGGCATATGGATTTGCTTGGCTCTGGGCCACAGTGATGGGGAAGAAGCATCGCCAGGTTTATTTGCCACGTCATCATCTCCAATTAAGGAATATGTCTTTCTATGTAATTGAATTTATTAATAAATATCGAAAATTGAGTGATACCAC

Fln Alignment:

Contig10482___SDPLLQKWVKSEANPVIVPPEGIGLTDFRDPTTGWIGEDGAWRITIGSKLEMTGVALIFKTEDFVKYEE-ENILHSVNDTGMWECVDFYPVAASGVSGLDTSAVGVGVKHVLKASFDDDKHDYYAIGTYNVTSQKFIPDDPEMDVGLGLRYDYGKYYASKSFYDPVKERRILWGWIGETDSEQDDLRKGWASLQTIPRHIWFDNKTKTNIIQWPVEEIDELRSAAVVVENVLLQPGSVVEVNTTEAAQLDIELVIEFPEDTAAIDAAEDNALYNCSTSGGAAGRGVLGPFGLLVIAEKNLTEHTAVYFYVVKSANGKLQTFFCHDELRSSLATDLILGVHGSSVPVLANESISVRTLVDHSIVESYAQGGRRCITSRVYPTQALDGAAKLFLFNNATTAVKVQSLNVWQMESVFLRPY
P80065________________SDPLLLDWIKYPDNPVMFPPPGIGSTDFRDPTTAWIGRDGKWRITIGSKVNKTGISLMYKTTDFITYELLDNLLHAVPGTGMWECVDFYPVSVTGSNGLDTSVNGPGVKHVLKSSLDDDRHDYYALGTYDPINDKWTPDNPELDVGIGLRLDYGKYYASKTFYDQDKERRLLWGWIGETDSESADLLKGWASVQSIPRTVVFDKKTGTNILQWPVKEVESLRSRSYEIDDVELKPGSLVPLKISSAAQLDIVASFEVDEE-AFKGTYEADASYNCTASEGAAGRGILGPFGILVLADDPLSELTPVYFYIAKGVDGNAKTYFCADQSRSSTASDVDKEVYGSDVPVLHGESLSMRLLVDHSIVESFAQGGRTVITSRVYPTRAIYSAARVFLFNNATGVSVTASVKAWQMASATLKPF

SNPs (tot: 20)

Position	A %	C %	G %	T %	Probability
58	87	12			0.992554
87	87		12		0.992554
94		87	12		0.992554
95		12		87	0.992554
130		66		33	1.0
145		10		90	0.90298
156		90		10	0.90298
548	83	16			0.994512
549		16		83	0.994512
552			83	16	0.994512
576	66		33		0.997452
580	66	33			0.997452
581			33	66	0.997452
901	50		50		1.0
1017	12	87			0.992554
1029		28		71	1.0
1437	10	90			0.90298
1445	83		16		0.994512
1453		16		83	0.994512
1503			33	66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain