| General Information |
| Organism: |
Pinus pinaster |
| Tissue: |
several |
| Description: |
454 Reads from University of Malaga assembled in UniGenes
|
| Assembly Statistics |
|
| Number of used reads: |
688028 |
| Number of unigenes: |
41246 |
| Mean contig length: |
653 |
| SNPs statistics |
|
| Tot. SNPs: |
105198 |
| Unigenes with SNPs: |
17113 |
| Mean SNPs per unigene: |
6.1 |
| SSRs statistics |
|
| Tot. SSRs: |
3191 |
| Mean SSRs per unigene: |
1.1 |
| SSRs di-nucl. : |
350 |
| SSRs tri-nucl. : |
1796 |
| SSRs > tri-nucl. : |
1045 |
| Annotations statistics |
|
| Annotated unigenes: |
37794 |
| Descriptions: |
26830 |
| Gos: |
4098 |
| Interpros: |
5037 |
| ECs: |
883 |
| Keggs: |
145 |
|
| Project components |
|
|
| Assembly components: |
|
| Unigenes file: |
uma_v2.0_unigenes.fasta |
|
| ACE file: |
uma_v2.0.ace |
|
|
| Download annotations for specified unigenes: |
|
|
|
|
| SFFs: |
| File 1: |
Canovas_RL1.sff |
Not available
|
| File 2: |
GD4IA4402.sff |
Not available
|
| File 3: |
GD4IA4403.sff |
Not available
|
| File 4: |
GD4IA4404.sff |
Not available
|
| File 5: |
GDTE5QK01.sff |
Not available
|
| | |
| SeqTrimNext reports: |
| | |
| File 1: |
uma_v2.0_report.pdf |
|
| File 2: |
|
Not Available
|
| File 3: |
|
Not Available
|
| File 4: |
|
Not Available
|
| File 5: |
|
Not Available
|
|
|
