SustainPineDB

Assembly Name: uma v2.0

UniGene Name: uma_v2.0_unigene257

Length: 988 nt

UniGene Fasta

Ace file of the UniGene uma_v2.0_unigene257

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene4302	2/2

Source	Descriptions	Term	Type	Identity
AutoFact	DUF868 domain containing protein	-	-	52%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	55%
Blast2go	protein	-	-	70%

Source	InterPros	Term	Type	Identity
Sma3	Protein phosphatase 2C, manganese/magnesium aspartate binding site	IPR000222	-	-
Sma3	Ribosomal protein L24e-related	IPR000988	-	-
Sma3	Phosphoglycerate/bisphosphoglycerate mutase, active site	IPR001345	-	-
Sma3	Protein phosphatase 2C-like	IPR001932	-	-
Sma3	Protein of unknown function DUF868, plant	IPR008586	-	-
Sma3	TRASH	IPR011017	-	-
Sma3	EGF-like region, conserved site	IPR013032	-	-
Sma3	Histidine phosphatase superfamily, clade-1	IPR013078	-	-
Sma3	Beta tubulin, autoregulation binding site	IPR013838	-	-
Sma3		IPR014045	-	-
Sma3	Protein phosphatase 2C	IPR015655	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LNS3

Fln msg: Distance to subject end: 25 aas,

Fln protein: MHRMVVSCFADYTDMRTKQNLITCLYQIKLAGSSKLVTVTWSRSLISQDFSVHFNDQESHCMCKVEMKPWFFCNRKGSKSFNVKGNEVFVFWDLSKAQYICGPEPHGGFYVALVCDGDLVLLLGDLKQEALKKTKARSLAMEPALLSRREHAFGKKYYATKAQFGEHGKTHDIVIECHTGGGTNQTKEPRLDVRVDKQVVLQVKHLVWKFRGNETIQIDGLPIEVFWDVHNWLFNPSTGHAVFMFQSSMNGRVSCPPAVLQWPNA

Protein Length: 266

Fln nts: ATGAACAGTCACATTAAATGCCCCAGGACAGGAAGCCTTGCAGAACAGACAGGCAGGAGGGGCCAGTAAAGCACATGGGTTGAAGAAATAGGGATAGCAAGTTGTGGTCCTAGAGGGTGAGGACGAAAAGCGCTTGCCCATATTCTGGTTTTGTTGAGATGGATGCATTTTATTCCCAGCATCTGTAGTAA_-_ATGCATCGGATGGTTGTTTCATGCTTCGCAGATTACACAGATATGAGGACAAAACAGAACTTGATCACTTGCCTGTATCAGATAAAGCTCGCAGGCTCATCCAAGCTTGTGACTGTAACATGGTCCAGAAGTCTGATAAGCCAGGACTTTAGTGTACATTTCAATGACCAAGAGAGCCATTGCATGTGTAAAGTTGAAATGAAGCCCTGGTTCTTCTGTAACAGGAAAGGATCCAAGAGCTTCAATGTGAAAGGAAATGAGGTCTTTGTGTTTTGGGATCTCAGCAAAGCTCAATACATCTGTGGCCCAGAGCCGCATGGGGGCTTCTATGTGGCCCTGGTCTGTGATGGGGATCTTGTTTTATTGCTTGGGGACTTGAAGCAAGAAGCCCTAAAGAAGACCAAAGCCAGATCGCTGGCCATGGAGCCTGCATTGTTGTCTAGGAGAGAACATGCATTTGGTAAGAAGTATTATGCAACAAAAGCCCAGTTTGGAGAACATGGGAAGACTCATGACATCGTTATAGAATGTCATACAGGAGGAGGGACTAACCAAACTAAGGAGCCAAGGTTGGATGTGAGAGTTGATAAGCAAGTTGTGCTGCAAGTTAAGCATCTGGTGTGGAAGTTTAGAGGGAATGAGACTATACAGATTGATGGGCTTCCTATTGAAGTGTTTTGGGATGTCCATAACTGGCTTTTTAATCCAAGCACAGGTCATGCAGTCTTCATGTTTCAGTCCTCAATGAATGGCAGGGTGTCATGCCCTCCTGCTGTTTTACAGTGGCCTAATGCACT

Fln Alignment:

Contig257___QNLITCLYQIKLAGSSKLVTVTWSRSLISQDFSVHFNDQESHCMCKVEMKPWFFCNRKGSKSFNVKGNEVFVFWDLSKAQYICGPEPHGGFYVAXXXXXXXXXXXXXXKQEALKKTKARSLAMEPALLSRREHAFGKKYYATKAQFGEHGKTHDIVIECHTGGGTNQTKEPRLDVRVDKQVVLQVKHLVWKFRGNETIQIDGLPIEVFWDVHNWLFNPSTGHAVFMFQSSMNGRVSCP
B8LNS3______________QNMVTCLYLTTLSGQTRLITVTWCKNLMGQGLSVNVDDPSYQCLCRVDMKSWLFWKKKGSKRFELGTTKVDVFWDLSSARYGSAPEPLEGYFVAVVSNEEVALLLGDMCKEAFKKTHAKPPA-ETVLISRKEHVFGKNCYTTKAQFCNSGRIHDIVIECQTGG----PREPKLCVRIDKQLVVQVKHLIWKFRGNQTISVDGLPIEMFWDVHDWLFNPSLGHAVFMFKTITSGEVQEP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain