SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene19551

Length: 670 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene19551 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene6718	4/4

Source	Descriptions	Term	Type	e value	Identity
AutoFact	60S ribosomal protein L26-2 n=2 Tax=Arabidopsis RepID=RL262_ARATH	-	-	3.0e-37	77%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	93%
Blast2go	60s ribosomal protein l26	-	-	0.0	98%

Source	ECs	Term	Type	e value	Identity
Blast2go	Hydrolases, Acting on acid anhydrides, Acting on acid anhydrides; catalyzing transmembrane movement of substances.	EC:3.6.3.-	-	0.0	98%

Source	GOs	Term	Type	Identity
Blast2go	proton transport	GO:0015992	Biological Process	98%
Blast2go	translation	GO:0006412	Biological Process	98%
Blast2go	structural constituent of ribosome	GO:0003735	Molecular Function	98%
Blast2go	hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	GO:0016820	Molecular Function	98%
Blast2go	large ribosomal subunit	GO:0015934	Cellular Component	98%
Blast2go	vacuolar proton-transporting V-type ATPase complex	GO:0016471	Cellular Component	98%

Source	InterPros	Term	Type	Identity
Sma3	KOW	IPR005824	-	-
Sma3	Ribosomal protein L24/L26, conserved site	IPR005825	-	-
Sma3	Ribosomal protein L24, SH3-like	IPR014723	-	-
Sma3	Ribosomal protein L26/L24P, eukaryotic/archaeal	IPR005756	-	-

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain