SustainPineDB

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Assembly info
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Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene18254

Length: 470 nt

UniGene Fasta

>biog2_v2.0_unigene18254
CCCATGAACATGATATTGTTCCACATTTGCCTCCATATTACACTTATTTTCCTCAGCGGACATACCACCATTTCCCGCGAGAGGTGTGGCTTTACAATCTTGGAGTGGGTAGTTTAAGATATGAGGTTGAAAAAGTTTGTGATGGCTCTGGTGAAGATCCATCATGCAGCAGATCAGTATCTGGTAACAGCGTTGCAGATCATCTGCAGTACTATGGTGTAAGCTTGCAAGCAGAATCATGGGGTTCATGTGGAATTCCCTGGAATTCTCAGATAAACAAGAATGATGAGAAGGTAGAAGTTGAGATTAAATCTTCAGTTGATTCAAGGGCACCTGGCAGTGTGACTGAAGGGAAAATGGACAATGGACAACACTCTGCTCTTTAGTATTGGAAAGAATTCCATATTCTTTCAATTGTACAGTCTGTAACATGCATCAATTATTTAGGTATTGTATTATTGATGATCTCA

Ace file of the UniGene biog2_v2.0_unigene18254

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene18000	2/2

Source	Descriptions	Term	Type	Identity
AutoFact	alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana] gb\|AAL24204.1\| AT5g18630/T1A4_10 [Arabidopsis thaliana] gb\|AAN31885.1\| putative triacylglycerol lipase [Arabidopsis thaliana] dbj\|BAE99159.1\| triacylglycerol lipase-like protein [Arabid	-	-	58%
FL-Next	tr=Lipase, putative; Ricinus communis (Castor bean).	-	-	67%
Blast2go	lipase precursor	-	-	76%

Source	InterPros	Term	Type	Identity
Sma3	Lipase, class 3	IPR002921	-	-
Sma3	Twin-arginine translocation pathway, signal sequence	IPR006311	-	-
Sma3		IPR017909	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: tr_plants

Fln subject: B9RT08

Fln msg: your sequence is shorter than subject: 128 - 356

Fln protein: HEHDIVPHLPPYYTYFPQRTYHHFPREVWLYNLGVGSLRYEVEKVCDGSGEDPSCSRSVSGNSVADHLQYYGVSLQAESWGSCGIPWNSQINKNDEKVEVEIKSSVDSRAPGSVTEGKMDNGQHSAL*

Protein Length: 129

Fln nts: CCCATGAACATGATATTGTTCCACATTTGCCTCCATATTACACTTATTTTCCTCAGCGGACATACCACCATTTCCCGCGAGAGGTGTGGCTTTACAATCTTGGAGTGGGTAGTTTAAGATATGAGGTTGAAAAAGTTTGTGATGGCTCTGGTGAAGATCCATCATGCAGCAGATCAGTATCTGGTAACAGCGTTGCAGATCATCTGCAGTACTATGGTGTAAGCTTGCAAGCAGAATCATGGGGTTCATGTGGAATTCCCTGGAATTCTCAGATAAACAAGAATGATGAGAAGGTAGAAGTTGAGATTAAATCTTCAGTTGATTCAAGGGCACCTGGCAGTGTGACTGAAGGGAAAATGGACAATGGACAACACTCTGCTCTTTAG___TATTGGAAAGAATTCCATATTCTTTCAATTGTACAGTCTGTAACATGCATCAATTATTTAGGTATTGTATTATTGATGATCTCA

Fln Alignment:

biogeco2_mira_c17223___HEHDIVPHLPPYYTYFPQRTYHHFPREVWLYNLGVGSLRYEVEKVCDGSGEDPSCSRSVSGNSVADHLQYYGVSLQAESWGSCGIPWNSQI---NKNDEKVEVEIKSSVDS
B9RT08__________________HEHDIVPHLPPYYSYFPQKTYHHFPREVWLYNIGVGSLVYRVEKVCDGTGEDPDCSRSVSGTSVSDHLHYYGVDLMGTTWRSCGIVMDSHVKEYGKTDIKGNIVLSRDVAS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain