SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene17766

Length: 309 nt

UniGene Fasta

>biog2_v2.0_unigene17766
AAAGAGGCAAAACCCTCTTCAATCAGTGATTCGCTATTGCAGCAATGGCTGGACTCTAGGGGAGAAAAGTCTGTTATATATATTTGCTTTGGTAGCCAGGCCTGCCTTTCAAATAAACAAATCGAGGAGATGGCAGCAGGGCTGGAGGCAACCGAAGAGTGTTTCATATGGGTCATGAGAGATCTGCCTAGTGGTCTGCCTGCTGATGAATATGGTGTGCTTCCCCAAGGTTTTGAAGAGAGAATGGAGGGAAGAGGTCTGATAATTAGAGGTTGGGCACCTCAGCTCTTGATCCTTTCACACCCTTCT

Ace file of the UniGene biog2_v2.0_unigene17766

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene342	2/2

Source	Descriptions	Term	Type	Identity
AutoFact	UDP-glucosyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RLH6_RICCO	-	-	46%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	84%
Blast2go	udp-glucosyl transferase 89b1	-	-	63%

Source	GOs	Term	Type	Identity
Blast2go	metabolic process	GO:0008152	Biological Process	63%
Blast2go	quercetin 4'-O-glucosyltransferase activity	GO:0080046	Molecular Function	63%
Blast2go	quercetin 7-O-glucosyltransferase activity	GO:0080044	Molecular Function	63%
Blast2go	quercetin 3-O-glucosyltransferase activity	GO:0080043	Molecular Function	63%

Source	InterPros	Term	Type	e value	Identity
Sma3	UDP-glucuronosyl/UDP-glucosyltransferase	IPR002213	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NX38

Fln msg: Distance to subject end: 116 aas, your sequence is shorter than subject: 103 - 468

Fln protein: KEAKPSSISDSLLQQWLDSRGEKSVIYICFGSQACLSNKQIEEMAAGLEATEECFIWVMRDLPSGLPADEYGVLPQGFEERMEGRGLIIRGWAPQLLILSHPS

Protein Length: 104

Fln nts: AAAGAGGCAAAACCCTCTTCAATCAGTGATTCGCTATTGCAGCAATGGCTGGACTCTAGGGGAGAAAAGTCTGTTATATATATTTGCTTTGGTAGCCAGGCCTGCCTTTCAAATAAACAAATCGAGGAGATGGCAGCAGGGCTGGAGGCAACCGAAGAGTGTTTCATATGGGTCATGAGAGATCTGCCTAGTGGTCTGCCTGCTGATGAATATGGTGTGCTTCCCCAAGGTTTTGAAGAGAGAATGGAGGGAAGAGGTCTGATAATTAGAGGTTGGGCACCTCAGCTCTTGATCCTTTCACACCCTTCT

Fln Alignment:

biogeco2_mira_c16060___KEAKPSSISDSLLQQWLDSRGEKSVIYICFGSQACLSNKQIEEMAAGLEATEECFIWVMRDLPSGLPADEYGVLPQGFEERMEGRGLIIRGWAPQLLILSHPS
A9NX38__________________ERGKPTTINESVFLQWLDSRGEKSVIYICFGSQACLSNKQVEEMAAGLETTEESFIWVIRDPPSGMPADEYGVLPQGFEERMEGRGLIIRGWAPQLLILSHPS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain