SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene17719

Length: 816 nt

UniGene Fasta

Ace file of the UniGene biog2_v2.0_unigene17719

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene7674	10/10

Source	Descriptions	Term	Type	Identity
AutoFact	Receptor-like kinase (Fragment) n=1 Tax=Marchantia polymorpha RepID=A7VM26_MARPO	-	-	83%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	52%
Blast2go	protein	-	-	86%

Source	ECs	Term	Type	Identity
Blast2go	2-alkenal reductase.	EC:1.3.1.74	-	86%
Blast2go	Mitogen-activated protein kinase kinase kinase.	EC:2.7.11.25	-	86%
Blast2go	Phosphoprotein phosphatase.	EC:3.1.3.16	-	86%

Source	GOs	Term	Type	Identity
Blast2go	protein phosphorylation	GO:0006468	Biological Process	86%
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	86%
Blast2go	microsporogenesis	GO:0009556	Biological Process	86%
Blast2go	tapetal cell fate specification	GO:0010234	Biological Process	86%
Blast2go	transmembrane receptor protein kinase activity	GO:0019199	Molecular Function	86%
Blast2go	2-alkenal reductase [NAD(P)] activity	GO:0032440	Molecular Function	86%
Blast2go	ATP binding	GO:0005524	Molecular Function	86%
Blast2go	protein binding	GO:0005515	Molecular Function	86%
Blast2go	MAP kinase kinase kinase activity	GO:0004709	Molecular Function	86%
Blast2go	phosphoprotein phosphatase activity	GO:0004721	Molecular Function	86%
Blast2go	integral to membrane	GO:0016021	Cellular Component	86%

Source	InterPros	Term	Type	Identity
Sma3	IQ motif, EF-hand binding site	IPR000048	-	-
Sma3	Intradiol ring-cleavage dioxygenase, C-terminal	IPR000627	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	-
Sma3	Myosin head, motor domain	IPR001609	-	-
Sma3	Leucine-rich repeat	IPR001611	-	-
Sma3	Enolpyruvate transferase domain	IPR001986	-	-
Sma3	Short-chain dehydrogenase/reductase SDR	IPR002198	-	-
Sma3	Glucose/ribitol dehydrogenase	IPR002347	-	-
Sma3	Dilute	IPR002710	-	-
Sma3	Myosin, N-terminal, SH3-like	IPR004009	-	-
Sma3	Phosphopantetheine attachment site	IPR006162	-	-
Sma3	Tyrosine-protein kinase, active site	IPR008266	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Leucine-rich repeat 2	IPR013101	-	-
Sma3	Leucine-rich repeat-containing N-terminal, type 2	IPR013210	-	-
Sma3	NAD(P)-binding domain	IPR016040	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	ABC transporter, conserved site	IPR017871	-	-
Sma3	Interleukin-4/interleukin-13, conserved site	IPR018096	-	-
Sma3	Dil domain	IPR018444	-	-

Full-Lengther Next Prediction

SNPs (tot: 4)

Position	A %	C %	G %	T %	Probability
463	20	80			0.995498
467	80		20		0.995493
468	80		20		0.995493
772		33		66	0.997467

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain