SustainPineDB

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Assembly info
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Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene17560

Length: 525 nt

UniGene Fasta

>biog2_v2.0_unigene17560
ATGGGCTCCATTGTTCATGCAAGCTCATTATTAATCCTCACTACCTTTTCTGACATTACACAGTTTTACCTCGAAGAAGCAAAAGGCAGGATCGATTGTGGAGGTTACATTTTTCCAAGGAGGCGTGGACAAATTCCAGCTTCTGAAACACAATTGCTTACAATTCAGTTCACATGGAGTGGTGTTCTAAAGTCACTTTCTAGCACTCTTATTGGGGTAAGCCCAGAGTTTGAGATAGCTCTATACACACTTTGCTTTTATGCGGGAGAGCAGGACAATCACATTGAATTGGGTCCATACAATGTGAACTTGAAATGCTATCGTCTTGAAGGGGATAAGATTGGATCAGCATTCCCTATTGCTGAAAATTAGATTCGGTCATATCCCAAAGTTATTTCAATGGCAGCTGCAAAGCCTACACATCTATAATGTCAGAGTATGTGTCATTGCTAGTGTGGCATACTCAGTTGTTATACTTTATAGTAGATGATTGAGAACAGTGTTTAGTGTTTATTCTATACTACA

Ace file of the UniGene biog2_v2.0_unigene17560

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene2859	1/2

Source	Descriptions	Term	Type	Identity
AutoFact	Placental protein 11, putative n=1 Tax=Ricinus communis RepID=B9RUR9_RICCO	-	-	55%
FL-Next	tr=Putative serine protease-like protein; Arabidopsis thaliana (Mouse-ear cress).	-	-	75%
Blast2go	uncharacterized protein	-	-	70%

Source	GOs	Term	Type	Identity
Blast2go	hydrolase activity, acting on ester bonds	GO:0016788	Molecular Function	70%
Blast2go	oxidoreductase activity	GO:0016491	Molecular Function	70%
Blast2go	plastid	GO:0009536	Cellular Component	70%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: tr_plants

Fln subject: Q8RWB6

Fln msg: your sequence is shorter than subject: 124 - 434

Fln protein: MGSIVHASSLLILTTFSDITQFYLEEAKGRIDCGGYIFPRRRGQIPASETQLLTIQFTWSGVLKSLSSTLIGVSPEFEIALYTLCFYAGEQDNHIELGPYNVNLKCYRLEGDKIGSAFPIAEN*

Protein Length: 125

Fln nts: ATGGGCTCCATTGTTCATGCAAGCTCATTATTAATCCTCACTACCTTTTCTGACATTACACAGTTTTACCTCGAAGAAGCAAAAGGCAGGATCGATTGTGGAGGTTACATTTTTCCAAGGAGGCGTGGACAAATTCCAGCTTCTGAAACACAATTGCTTACAATTCAGTTCACATGGAGTGGTGTTCTAAAGTCACTTTCTAGCACTCTTATTGGGGTAAGCCCAGAGTTTGAGATAGCTCTATACACACTTTGCTTTTATGCGGGAGAGCAGGACAATCACATTGAATTGGGTCCATACAATGTGAACTTGAAATGCTATCGTCTTGAAGGGGATAAGATTGGATCAGCATTCCCTATTGCTGAAAATTAG___ATTCGGTCATATCCCAAAGTTATTTCAATGGCAGCTGCAAAGCCTACACATCTATAATGTCAGAGTATGTGTCATTGCTAGTGTGGCATACTCAGTTGTTATACTTTATAGTAGATGATTGAGAACAGTGTTTAGTGTTTATTCTATACTACA

Fln Alignment:

biogeco2_mira_c15434___FSDITQFYLEEAKGRIDCGGYIFPRRRGQIPASETQLLTIQFTWSGVLKSLSSTLIGVSPEFEIALYTLCFYAGEQDNHIELGPYNVNLKCYRLEGDKIGSAFPIAEN
Q8RWB6__________________FHNWLQFYLEEAKGTVDYQGYIFPRRRGEIPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTMCFFMGTEDNHIQLGPYNVNVKCYRLGNNRIGSAFPIAES

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain