SustainPineDB

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Assembly info
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Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene17075

Length: 218 nt

UniGene Fasta

>biog2_v2.0_unigene17075
TGAAGTTAATAAAATGTCCTATGTTGTCATCGAGATGGCTCCGGTCACGTATATTGACTCCAGCGCTGCTCAGGCCTTGAAGGAGCTCTGTGAAGAATACAAAGCACGCAACATTCAGATGGCCCTCTCGAACCCTAATCGAGAAGTTCTCTCAACACTTGCCATGGCTGGAGTCCTTGAACTTCTTGGCAAGCAGTGGTATTTTGNGAGAGTCCACG

Ace file of the UniGene biog2_v2.0_unigene17075

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene51	2/2

Source	Descriptions	Term	Type	Identity
AutoFact	sulfate transporter [Populus tremula x Populus alba]	-	-	68%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	90%
Blast2go	sulfate transporter	-	-	85%

Source	GOs	Term	Type	Identity
Blast2go	sulfate transport	GO:0008272	Biological Process	85%
Blast2go	transmembrane transport	GO:0055085	Biological Process	85%
Blast2go	secondary active sulfate transmembrane transporter activity	GO:0008271	Molecular Function	85%
Blast2go	integral to membrane	GO:0016021	Cellular Component	85%

Source	InterPros	Term	Type	Identity
Sma3	Sulphate transporter/antisigma-factor antagonist STAS	IPR002645	-	-
Sma3	Sulphate anion transporter	IPR001902	-	-
Sma3	Sulphate transporter	IPR011547	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NX60

Fln msg: Distance to subject end: 64 aas, your sequence is shorter than subject: 72 - 689

Fln protein: EVNKMSYVVIEMAPVTYIDSSAAQALKELCEEYKARNIQMALSNPNREVLSTLAMAGVLELLGKQWYFERVH

Protein Length: 73

Fln nts: TGAAGTTAATAAAATGTCCTATGTTGTCATCGAGATGGCTCCGGTCACGTATATTGACTCCAGCGCTGCTCAGGCCTTGAAGGAGCTCTGTGAAGAATACAAAGCACGCAACATTCAGATGGCCCTCTCGAACCCTAATCGAGAAGTTCTCTCAACACTTGCCATGGCTGGAGTCCTTGAACTTCTTGGCAAGCAGTGGTATTTTGaGAGAGTCCACG

Fln Alignment:

biogeco2_mira_c14833___EVNKMSYVVIEMAPVTYIDSSAAQALKELCEEYKARNIQMALSNPNREVLSTLAMAGVLELLGKQWYFERVH
A9NX60__________________EGNKMFYVVIEMAPVTYIDSSAAQALKELYQEYKARNIQMALSNPNREVLSTLAMSGVLELVGKQWYFVRVH

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain