SustainPineDB

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Assembly info
Unigenes
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SSRs
Descriptions
GOs
ECs
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Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene16565

Length: 230 nt

UniGene Fasta

>biog2_v2.0_unigene16565
ATGGGGGGATTTGCACATCGCAGCTTTTATCCACTTCGAGGGTGGAGTCGTCTCAAAACATTCGAAGGGAGGAGGTGTCCAAGTTAGTGAGTGCCCTGTTCGAGATAGGAATTAAAGACGAGGCGTCGGCTGTTGTAGACGTGAGATCGATAATGATTGATCTTATATTTGCTATTATTGTACGATCAATGTTACCGGACAAAAGCTACATGGCCAGCGTCGCGGAAGAC

Ace file of the UniGene biog2_v2.0_unigene16565

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene11797	2/2

Source	Descriptions	Term	Type	Identity
AutoFact	Cytochrome P450, putative n=1 Tax=Ricinus communis RepID=B9R747_RICCO	-	-	40%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	74%
Blast2go	cytochrome p450	-	-	61%

Source	GOs	Term	Type	Identity
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	61%
Blast2go	heme binding	GO:0020037	Molecular Function	61%
Blast2go	monooxygenase activity	GO:0004497	Molecular Function	61%
Blast2go	electron carrier activity	GO:0009055	Molecular Function	61%

Source	InterPros	Term	Type	Identity
Sma3	Cytochrome P450	IPR001128	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3		IPR017973	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LQI3

Fln msg: Distance to subject end: 205 aas, your sequence is shorter than subject: 76 - 414

Fln protein: GGICTSQLLSTSRVESSQNIRREEVSKLVSALFEIGIKDEASAVVDVRSIMIDLIFAIIVRSMLPDKSYMASVAED

Protein Length: 77

Fln nts: ATGGGGGGATTTGCACATCGCAGCTTTTATCCACTTCGAGGGTGGAGTCGTCTCAAAACATTCGAAGGGAGGAGGTGTCCAAGTTAGTGAGTGCCCTGTTCGAGATAGGAATTAAAGACGAGGCGTCGGCTGTTGTAGACGTGAGATCGATAATGATTGATCTTATATTTGCTATTATTGTACGATCAATGTTACCGGACAAAAGCTACATGGCCAGCGTCGCGGAAGAC

Fln Alignment:

biogeco2_mira_c14208___ICTSQLLSTSRVESSQNIRREEVSKLVSALFE----IGIKDEASAVVDVRSIMIDLIFAIIVRSMLPDKSYMASVAE
B8LQI3__________________ICTSQLLSASRVESSQHIRREEVSKLVRGLFQSCTQMGIQDEASTVVDMRSIMVDLIFDTIVRSILPDKSYMGSAGE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain