SustainPineDB

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Assembly info
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Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene16191

Length: 432 nt

UniGene Fasta

>biog2_v2.0_unigene16191
ATGGTGGGGGAGCTTAGAGAAGCCACTGAAAAGAAAGGAAAGTTGGAGAAGACGTTGAGACAGAAGAGCTTCAAGGATGCAGTTGGGTATGTGTCTAATGAATCTCTTACTTTGACTCCTCAGTTCTTTATATCTACCGTACAGGCAGCAGCCAAAGCAGCTCATGATTTCACAAAGCTGATCATAAATATGATGAAGACTGCAGAGTGGGATTTGGATGCTGCTGCCAATTCTATTGAACCAGGCATCCTATATGCTAAGAGAGCACATAAGAAATATGCTTTTGAGTCCTATGTCTGTCAAAGAATGTTTAGTGGGTTTGAGAATGAGAATTTCTATGTTACAGATTCTCTTCCTGCCATCTTGGATCCTGAAAGCAGAGACATGATTTCATGACTCAATTCCAGGATATGCAATCCCGGGATCCATTTG

Ace file of the UniGene biog2_v2.0_unigene16191

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene18012	1/2

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DUF641 multi-domain protein	-	-	8.40779e-45	57%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	73%
Blast2go	uncharacterized protein	-	-	0.0	73%

Source	GOs	Term	Type	e value	Identity
Blast2go	vacuolar membrane	GO:0005774	Cellular Component	0.0	73%

Source	InterPros	Term	Type	Identity
Sma3	Sec1-like protein	IPR001619	-	-
Sma3	Domain of unknown function DUF641, plant	IPR006943	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: D5AC56

Fln msg: ERROR#3, very serious frame error, Overlapping hits, possible frame ERROR between 375 and 375, Distance to subject end: 172 aas, your sequence is shorter than subject: 144 - 214

Fln protein: MVGELREATEKKGKLEKTLRQKSFKDAVGYVSNESLTLTPQFFISTVQAAAKAAHDFTKLIINMMKTAEWDLDAAANSIEPGILYAKRAHKKYAFESYVCQRMFSGFENENFYVTDSLPAILDPxxQRHDFMTQFQDMQSRDPF

Protein Length: 145

Fln nts: _-_ATGGTGGGGGAGCTTAGAGAAGCCACTGAAAAGAAAGGAAAGTTGGAGAAGACGTTGAGACAGAAGAGCTTCAAGGATGCAGTTGGGTATGTGTCTAATGAATCTCTTACTTTGACTCCTCAGTTCTTTATATCTACCGTACAGGCAGCAGCCAAAGCAGCTCATGATTTCACAAAGCTGATCATAAATATGATGAAGACTGCAGAGTGGGATTTGGATGCTGCTGCCAATTCTATTGAACCAGGCATCCTATATGCTAAGAGAGCACATAAGAAATATGCTTTTGAGTCCTATGTCTGTCAAAGAATGTTTAGTGGGTTTGAGAATGAGAATTTCTATGTTACAGATTCTCTTCCTGCCATCTTGGATCCTxxxxxxCAGAGACATGATTTCATGACTCAATTCCAGGATATGCAATCCCGGGATCCATTTG

Fln Alignment:

biogeco2_mira_c13754___MFSGFENENFYVTDSLPAILDPEKQRHDFMTQFQDMQSRDP
D5AC56__________________MFNGFENENFYLTGSLSSIIDPEKHRNDCFTQFLDMQNMEP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain