SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene15973

Length: 352 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene15973 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene11354	2/2

Source	Descriptions	Term	Type	Identity
AutoFact	WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RWJ4_RICCO	-	-	71%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	82%
Blast2go	transcriptional corepressor leunig	-	-	79%

Source	ECs	Term	Type	e value	Identity
Blast2go	[Myosin heavy-chain] kinase.	EC:2.7.11.7	-	0.0	79%

Source	GOs	Term	Type	Identity
Blast2go	vesicle-mediated transport	GO:0016192	Biological Process	79%
Blast2go	intracellular protein transport	GO:0006886	Biological Process	79%
Blast2go	transcription regulator activity	GO:0030528	Molecular Function	79%
Blast2go	myosin heavy chain kinase activity	GO:0016905	Molecular Function	79%
Blast2go	single-stranded DNA binding	GO:0003697	Molecular Function	79%
Blast2go	structural molecule activity	GO:0005198	Molecular Function	79%
Blast2go	membrane coat	GO:0030117	Cellular Component	79%

Source	InterPros	Term	Type	Identity
Sma3	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	IPR000194	-	-
Sma3	WD40 repeat	IPR001680	-	-
Sma3	LisH dimerisation motif	IPR006594	-	-
Sma3	Single-stranded DNA-binding protein, SSDP	IPR007591	-	-
Sma3	LisH dimerisation motif, subgroup	IPR013720	-	-
Sma3	WD40/YVTN repeat-like-containing domain	IPR015943	-	-
Sma3	WD40-repeat-containing domain	IPR017986	-	-
Sma3	WD40 repeat, conserved site	IPR019775	-	-
Sma3		IPR019782	-	-

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain