SustainPineDB

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Assembly info
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Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene15722

Length: 368 nt

UniGene Fasta

>biog2_v2.0_unigene15722
ATGGGGATTCTCGCAGCGGGAGCAACCCCAGCCAAAGAAGGATAACGTAGCAGCCATGGCCGCGTCCCTCGCAACAGGATCCGCGCTACAAGCCGCGGCCACGCTTCTCCAACCAACAAAGCTCAGCGTCACGCGTAGCTCCTCCAGGCTATCGTCCTCGTCCCCGCATGTCTCAAGGGCCTTCGGATTAGAACCCGCGACCTCTGCGCGGGTGTCCTGCTCCTTGCAGGACGACGTCAAGGAGAATATCAAGGACGTATCGGCGTCCAAGGGAACTATCACCCTCAGCGTCAGCAAGAGTAAGCCCGAAACGGGCGAGGTGATTGGTGTGTTCGAGAGCCTTCAGCCCTCCGACACCGATTTGGGCT

Ace file of the UniGene biog2_v2.0_unigene15722

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene15529	2/2

Source	Descriptions	Term	Type	Identity
AutoFact	Oxygen-evolving enhancer protein 1, chloroplastic n=1 Tax=Fritillaria agrestis RepID=PSBO_FRIAG	-	-	76%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	56%
Blast2go	chloroplast oxygen-evolving enhancer protein 1	-	-	89%

Source	GOs	Term	Type	e value	Identity
Blast2go	intracellular part	GO:0044424	Cellular Component	0.0	89%

Source	InterPros	Term	Type	e value	Identity
Sma3	Photosystem II PsbO, manganese-stabilising	IPR002628	-	0.0	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: C0PRZ1

Fln msg: Distance to subject end: 20 aas, your sequence is shorter than subject: 104 - 341

Fln protein: MAASLATGSALQAAATLLQPTKLSVTRSSSRLSSSSPHVSRAFGLEPATSARVSCSLQDDVKENIKDVSASKGTITLSVSKSKPETGEVIGVFESLQPSDTDLG

Protein Length: 105

Fln nts: ATGGGGATTCTCGCAGCGGGAGCAACCCCAGCCAAAGAAGGATAACGTAGCAGCC_-_ATGGCCGCGTCCCTCGCAACAGGATCCGCGCTACAAGCCGCGGCCACGCTTCTCCAACCAACAAAGCTCAGCGTCACGCGTAGCTCCTCCAGGCTATCGTCCTCGTCCCCGCATGTCTCAAGGGCCTTCGGATTAGAACCCGCGACCTCTGCGCGGGTGTCCTGCTCCTTGCAGGACGACGTCAAGGAGAATATCAAGGACGTATCGGCGTCCAAGGGAACTATCACCCTCAGCGTCAGCAAGAGTAAGCCCGAAACGGGCGAGGTGATTGGTGTGTTCGAGAGCCTTCAGCCCTCCGACACCGATTTGGGCT

Fln Alignment:

biogeco2_mira_c13185___AFGLEPATSARVSCSLQDDVKENIKDVSASKGTITLSVSKS
C0PRZ1__________________AFGFEPATSARVSCSLQDDVKEFAEKCAGATKIAALALAAS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain