SustainPineDB

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Assembly info
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Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene14985

Length: 296 nt

UniGene Fasta

>biog2_v2.0_unigene14985
ATGGGAAGTTGGCATCGGGTGATGAAGCACTGAGCGAGTTTCAGCAGGAGGTAGTTCAGTTGGCTGCAGTTCTGAACGGAGATCATTCGCTGAACAGTTTTCCAGACGAGGGAATGTTTGGGAGGTCGATGAAGGTGAAGCAAGCAGCTCAGTATGTTGAGAAGGGCATGGCACGTTTCACGGAGGCAAGTATAGATGCTTTAAACCTCGGGGCATCAGATTTTGTGATCGTCCATATGAAACCTTCGCTCACATCCAGAAAAACCAACCCCTGATATGTAACGCTGCTTTACTTA

Ace file of the UniGene biog2_v2.0_unigene14985

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene24926	3/3

Source	Descriptions	Term	Type	Identity
AutoFact	non-specific phospholipase C6 [Arabidopsis thaliana] dbj\|BAC22511.1\| phosphatidylglycerol specific phospholipase C [Arabidopsis thaliana] gb\|AEE78437.1\| non-specific phospholipase C6 [Arabidopsis thaliana]	-	-	64%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	48%
Blast2go	protein	-	-	77%

Source	InterPros	Term	Type	Identity
Sma3	Ammonium transporter	IPR001905	-	-
Sma3	Villin headpiece	IPR003128	-	-
Sma3	Gelsolin	IPR007122	-	-
Sma3	Gelsolin domain	IPR007123	-	-
Sma3	Phosphoesterase	IPR007312	-	-
Sma3		IPR010256	-	-
Sma3	Ammonium transporter, conserved site	IPR018047	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LR27

Fln msg: your sequence is shorter than subject: 91 - 529

Fln protein: GKLASGDEALSEFQQEVVQLAAVLNGDHSLNSFPDEGMFGRSMKVKQAAQYVEKGMARFTEASIDALNLGASDFVIVHMKPSLTSRKTNP*

Protein Length: 92

Fln nts: ATGGGAAGTTGGCATCGGGTGATGAAGCACTGAGCGAGTTTCAGCAGGAGGTAGTTCAGTTGGCTGCAGTTCTGAACGGAGATCATTCGCTGAACAGTTTTCCAGACGAGGGAATGTTTGGGAGGTCGATGAAGGTGAAGCAAGCAGCTCAGTATGTTGAGAAGGGCATGGCACGTTTCACGGAGGCAAGTATAGATGCTTTAAACCTCGGGGCATCAGATTTTGTGATCGTCCATATGAAACCTTCGCTCACATCCAGAAAAACCAACCCCTGA___TATGTAACGCTGCTTTACTTA

Fln Alignment:

biogeco2_mira_c12280___ASGDEALSEFQQEVVQLAAVLNGDHSLNSFPDEGMFGRSMKVKQAAQYVEKGMARFTEASIDALNLGASDFVIVHMKPSLTSRKTN
B8LR27__________________ANEEAKLSDFQKELVQLAAILNGDYTLRSYPDE--IGKKMNVREGKKYMGDSVRRFFEAGRLAKSLGADDHEIVKMRPSLTTRSTS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain