SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene14770

Length: 332 nt

UniGene Fasta

>biog2_v2.0_unigene14770
AAGGTTATGTAGCGGAGGCTTTATGGGAGAAATTTCCTGTATACTGTGTTGGACCATTGCTCCCTGTGGCCTACCTCGACAACTCAGGTCCGCGCGACTCCGTTTTCGGGACCAGCTCGAGGTTGGAGATCGATTGCACAGAATGGTTGGACGATAAGCCACCAAAATCGGTATTATACGTTTCGTTCGGCAGTCTACTCTCTGTTTCGATAAGCCAAATAGAAGAAATAGCAATGGGTTTAAAGGAGAGCGGTTATGGTTTCATCTGGGTGCTTCGACGCCCCAGCAACGAGACCACTGAAGTCTCCTCTGTATTGCTGGACAACTTTTTG

Ace file of the UniGene biog2_v2.0_unigene14770

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene9645	3/3

Source	Descriptions	Term	Type	Identity
AutoFact	UDP-glycosyltransferase-like protein [Arabidopsis thaliana] sp\|Q9SJL0.1\|U86A1_ARATH RecName: Full=UDP-glycosyltransferase 86A1 gb\|AAD31582.1\| putative glucosyltransferase [Arabidopsis thaliana] gb\|AAL06924.1\| At2g36970/T1J8.15 [Arabidopsis thaliana] gb\|AA	-	-	38%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	77%
Blast2go	udp-glycosyltransferase-like protein	-	-	63%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Glycosyltransferases, Hexosyltransferases.	EC:2.4.1.-	-	0.0	63%

Source	KEGGs	Term	Identity
Blast2go	Fructose and mannose metabolism	00051	63%
Blast2go	N-Glycan biosynthesis	00510	63%
Blast2go	Mucin type O-Glycan biosynthesis	00512	63%
Blast2go	Various types of N-glycan biosynthesis	00513	63%
Blast2go	Other types of O-glycan biosynthesis	00514	63%
Blast2go	Biosynthesis of 12-, 14- and 16-membered macrolides	00522	63%
Blast2go	Glycosaminoglycan biosynthesis - keratan sulfate	00533	63%
Blast2go	Lipopolysaccharide biosynthesis	00540	63%
Blast2go	Peptidoglycan biosynthesis	00550	63%
Blast2go	Glycerolipid metabolism	00561	63%
Blast2go	Glycosylphosphatidylinositol(GPI)-anchor biosynthesis	00563	63%
Blast2go	Sphingolipid metabolism	00600	63%
Blast2go	Glycosphingolipid biosynthesis - lacto and neolacto series	00601	63%
Blast2go	Glycosphingolipid biosynthesis - globo series	00603	63%
Blast2go	Glycosphingolipid biosynthesis - ganglio series	00604	63%
Blast2go	Carotenoid biosynthesis	00906	63%
Blast2go	Zeatin biosynthesis	00908	63%
Blast2go	Flavonoid biosynthesis	00941	63%
Blast2go	Anthocyanin biosynthesis	00942	63%
Blast2go	Flavone and flavonol biosynthesis	00944	63%
Blast2go	Stilbenoid, diarylheptanoid and gingerol biosynthesis	00945	63%
Blast2go	Betalain biosynthesis	00965	63%
Blast2go	Biosynthesis of type II polyketide products	01057	63%
Blast2go	Metabolic pathways	01100	63%
Blast2go	Biosynthesis of secondary metabolites	01110	63%

Source	GOs	Term	Type	e value	Identity
Blast2go	metabolic process	GO:0008152	Biological Process	0.0	63%
Blast2go	transferase activity, transferring hexosyl groups	GO:0016758	Molecular Function	0.0	63%

Source	InterPros	Term	Type	e value	Identity
Sma3	UDP-glucuronosyl/UDP-glucosyltransferase	IPR002213	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5A9K7

Fln msg: Distance to subject end: 141 aas, your sequence is shorter than subject: 110 - 474

Fln protein: GYVAEALWEKFPVYCVGPLLPVAYLDNSGPRDSVFGTSSRLEIDCTEWLDDKPPKSVLYVSFGSLLSVSISQIEEIAMGLKESGYGFIWVLRRPSNETTEVSSVLLDNFL

Protein Length: 111

Fln nts: AAGGTTATGTAGCGGAGGCTTTATGGGAGAAATTTCCTGTATACTGTGTTGGACCATTGCTCCCTGTGGCCTACCTCGACAACTCAGGTCCGCGCGACTCCGTTTTCGGGACCAGCTCGAGGTTGGAGATCGATTGCACAGAATGGTTGGACGATAAGCCACCAAAATCGGTATTATACGTTTCGTTCGGCAGTCTACTCTCTGTTTCGATAAGCCAAATAGAAGAAATAGCAATGGGTTTAAAGGAGAGCGGTTATGGTTTCATCTGGGTGCTTCGACGCCCCAGCAACGAGACCACTGAAGTCTCCTCTGTATTGCTGGACAACTTTTTG

Fln Alignment:

biogeco2_mira_c12033___GYVAEALWEKFPVYCVGPLLPVAYLDNSGPRDSVFGTSSRLEIDCTEWLDDKPPKSVLYVSFGSLLSVSISQIEEIAMGLKESGYGFIWVLRRPSNETTEVSSVLLDNFL
D5A9K7__________________GHVVEALWEKMRVYCVGPLLPSAYLDLSDPRDSVVGTSYRVEMDCTQWLDDKAPKSVIYVSFGSLLPMSITQIEEIAMGLKESDYNFIWVLRRPSNECAEVSSMLPYGFL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain