SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene14030

Length: 565 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene14030 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene15614	5/5

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Alba DNA/RNA-binding protein [Arabidopsis thaliana] sp\|O22969.1\|Y2416_ARATH RecName: Full=Uncharacterized protein At2g34160 gb\|AAB67633.1\| expressed protein [Arabidopsis thaliana] gb\|AAM60985.1\| unknown [Arabidopsis thaliana] dbj\|BAC42164.1\| unknown prote	-	-	1.0e-37	71%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	95%
Blast2go	protein	-	-	0.0	89%

Source	GOs	Term	Type	e value	Identity
Blast2go	nucleus	GO:0005634	Cellular Component	0.0	89%
Blast2go	plasma membrane	GO:0005886	Cellular Component	0.0	89%

Source	InterPros	Term	Type	e value	Identity
Sma3	DNA/RNA-binding protein Alba-like	IPR002775	-	0.0	-
Sma3	Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related	IPR014560	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	C %	T %	Probability
145		33	66	0.997452
205		25	75	0.996473
225	66	33		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain