SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene13671

Length: 276 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

>biog2_v2.0_unigene13671
GGGGAAAGAAGAATCCTGGCACTGATCATGAATCTGTGAAGAGATTCTTGGAAAAGGTCAAGAAGGCAAAAATTATGCAAATTGACAGTTGGCATATACGCATGAGGATGCGAATTCCAGCAGAAGGTCCACTTGATCCAGTAGCACCTTTAGAACTGCCACATTCTCTTCATGCTTTCAAACGCCTTTCTCAATCGGATGTACTGAATGAGGAAGGATATCATACCTTTCGTGGAGGATTTTGGAATTACTTCAGCCTAGGAATGGATGCACAAG

Ace file of the UniGene biog2_v2.0_unigene13671 (antisense)

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene2132	2/2

Source	Descriptions	Term	Type	Identity
AutoFact	Diacylglycerol kinase, alpha, putative n=1 Tax=Ricinus communis RepID=B9RW81_RICCO	-	-	70%
FL-Next	tr=OSJNBa0043L09.15 protein; Oryza sativa subsp. japonica (Rice).	-	-	75%
Blast2go	diacylglycerol kinase 5	-	-	79%

Source	ECs	Term	Type	e value	Identity
Blast2go	Diacylglycerol kinase.	EC:2.7.1.107	-	0.0	79%

Source	KEGGs	Term	Identity
Blast2go	Glycerolipid metabolism	00561	79%
Blast2go	Glycerophospholipid metabolism	00564	79%
Blast2go	Metabolic pathways	01100	79%
Blast2go	Phosphatidylinositol signaling system	04070	79%

Source	GOs	Term	Type	e value	Identity
Blast2go	activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway	GO:0007205	Biological Process	0.0	79%
Blast2go	diacylglycerol kinase activity	GO:0004143	Molecular Function	0.0	79%

Source	InterPros	Term	Type	Identity
Sma3	Diacylglycerol kinase, accessory domain	IPR000756	-	-
Sma3	Diacylglycerol kinase, catalytic domain	IPR001206	-	-
Sma3	Diacylglycerol kinase, plant	IPR016961	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: Q7XQT2

Fln msg: Distance to subject end: 250 aas, your sequence is shorter than subject: 91 - 499

Fln protein: GKKNPGTDHESVKRFLEKVKKAKIMQIDSWHIRMRMRIPAEGPLDPVAPLELPHSLHAFKRLSQSDVLNEEGYHTFRGGFWNYFSLGMDAQ

Protein Length: 92

Fln nts: GGGGAAAGAAGAATCCTGGCACTGATCATGAATCTGTGAAGAGATTCTTGGAAAAGGTCAAGAAGGCAAAAATTATGCAAATTGACAGTTGGCATATACGCATGAGGATGCGAATTCCAGCAGAAGGTCCACTTGATCCAGTAGCACCTTTAGAACTGCCACATTCTCTTCATGCTTTCAAACGCCTTTCTCAATCGGATGTACTGAATGAGGAAGGATATCATACCTTTCGTGGAGGATTTTGGAATTACTTCAGCCTAGGAATGGATGCACAAG

Fln Alignment:

biogeco2_mira_c10679___GKKNPGTDHESVKRFLEKVKKAKIMQIDSWHIRMRMRIPAEGPLDPVAPLELPHSLHAFKRLSQSDVLNEEGYHTFRGGFWNYFSLGMDAQ
Q7XQT2__________________GKKNPTTDQEAVKSFLGQVKKAREMNIDSWHIIMRMRAPQEGPCEPIAPLELPHSLHAFHRVSGSDSLNMEGYHTYRGGFWNYFSMGMDAQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain