SustainPineDB

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Assembly info
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ECs
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Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene13110

Length: 491 nt

UniGene Fasta

>biog2_v2.0_unigene13110
ATGGGGGCACTATTGAGATCCTCGACAAACCACAGCCCACGACACGACGACGAGGATAACAGAAAGTAAGTAAAGGGCGAGTGCGAGCGCAGGGGCAAAGAAGTGAAAGAGCATGGCCGAAGAGTTGGAAGAGTGGTGCCGTTGTCTTCCGAAGGTGGAGCTTCATGCTCATCTCAACGGGTCTATTCGCGATACCACGCTACTAGAACTTGCAAGAGAGAGGAGCAAGAAGGGCCAATTAGTTCTTTCTGATTTTGAAGATGTTATCTTAAAAGATGTGGCTCCCTGCAGGAATGCTTCAAGTTGTTTGACTTGATCCATGTGCTCACCACGGACCATGGTACCATTAGTAGAGTTGCTAAAGAAGTTATTGAAGACTTTGCAGCAGAAAATGTCATTTACTTGGAGCTACGCACAACACCAAAGAAGAATGAAGCTATAGGTATGAGTAAGCGTTCATATGTGGAAGCAGTTCTCGCTGGGCTCAAGGC

Ace file of the UniGene biog2_v2.0_unigene13110

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene2833	1/2

Source	Descriptions	Term	Type	Identity
AutoFact	Deaminase n=3 Tax=Andropogoneae RepID=B6TRX4_MAIZE	-	-	60%
FL-Next	tr=Deaminase; Zea mays (Maize).	-	-	63%
Blast2go	adenosine deaminase-like	-	-	75%

Source	GOs	Term	Type	Identity
Blast2go	purine ribonucleoside monophosphate biosynthetic process	GO:0009168	Biological Process	75%
Blast2go	deaminase activity	GO:0019239	Molecular Function	75%
Blast2go	hydrolase activity	GO:0016787	Molecular Function	75%

Source	InterPros	Term	Type	e value	Identity
Sma3	Adenosine/AMP deaminase domain	IPR001365	-	0.0	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	0.0	-

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: tr_plants

Fln subject: B6TRX4

Fln msg: Overlapping hits, possible frame ERROR between 274 and 268, Distance to subject end: 246 aas, Unexpected STOP codon in 5 prime region, your sequence is shorter than subject: 126 - 383

Fln protein: MAEELEEWCRCLPKVELHAHLNGSIRDTTLLELARERSKKGQLVLSDFEDVxxxxCGSLQECFKLFDLIHVLTTDHGTISRVAKEVIEDFAAENVIYLELRTTPKKNEAIGMSKRSYVEAVLAGLK

Protein Length: 127

Fln nts: ATGGGGGCACTATTGAGATCCTCGACAAACCACAGCCCACGACACGACGACGAGGATAACAGAAAGTAAGTAAAGGGCGAGTGCGAGCGCAGGGGCAAAGAAGTGAAAGAGC_-_ATGGCCGAAGAGTTGGAAGAGTGGTGCCGTTGTCTTCCGAAGGTGGAGCTTCATGCTCATCTCAACGGGTCTATTCGCGATACCACGCTACTAGAACTTGCAAGAGAGAGGAGCAAGAAGGGCCAATTAGTTCTTTCTGATTTTGAAGATGTTxxxxxxxxxxxxTGTGGCTCCCTGCAGGAATGCTTCAAGTTGTTTGACTTGATCCATGTGCTCACCACGGACCATGGTACCATTAGTAGAGTTGCTAAAGAAGTTATTGAAGACTTTGCAGCAGAAAATGTCATTTACTTGGAGCTACGCACAACACCAAAGAAGAATGAAGCTATAGGTATGAGTAAGCGTTCATATGTGGAAGCAGTTCTCGCTGGGCTCAAGGC

Fln Alignment:

biogeco2_mira_c10005___EELEEWCRCLPKVELHAHLNGSIRDTTLLELARERSKKGQLVLSDFEDVIxxRCGSLQECFKLFDLIHVLTTDHGTISRVAKEVIEDFAAENVIYLELRTTPKKNEAIGMSKRSYVEAVLAGLK
B6TRX4__________________EEMREWCVALPKVELHAHLNGSVRNSTLLELAKQLGDKGIIVFEDVKDVIxxSDRSLPECFKLFDLFHILTTDHDTVTRIAKEVVEDFAAENVVYLEIRTTPKNNEAKGMTKRSYMDAVIKGLK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain