UniGene Name: biog2_v2.0_unigene12769
Length: 213 nt
UniGene Fasta |
---|
>biog2_v2.0_unigene12769
A |
Ace file of the UniGene biog2_v2.0_unigene12769 |
---|
If you push the Download ace button, you will download an ace file of this UniGene.
To watch this ACE file you will need an ACE viewer program as Tablet:
Go to the Tablet ACE viewer Web
Annotations |
---|
Parent Assembly | Parent UniGene | Reads (related/total) |
---|---|---|
SustainPine v2.0 | sp_v2.0_unigene87 | 1/2 |
Source | Descriptions | Term | Type | e value | Identity |
---|---|---|---|---|---|
AutoFact | nucleotidyltransferase-like protein [Arabidopsis thaliana] gb|AAK25891.1|AF360181_1 unknown protein [Arabidopsis thaliana] gb|AAK64074.1| unknown protein [Arabidopsis thaliana] gb|AAC06161.2| expressed protein [Arabidopsis thaliana] gb|AEC10577.1| nucleot | - | - | 0.0 | 50% |
Blast2go | nucleotidyltransferase-like protein | - | - | 0.0 | 77% |
Source | ECs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Blast2go | Transferases, Transferring phosphorous-containing groups, Nucleotidyltransferases. | EC:2.7.7.- | - | 0.0 | 77% |
Source | KEGGs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Blast2go | Amino sugar and nucleotide sugar metabolism | 00520 | 0.0 | 77% | |
Blast2go | Lipopolysaccharide biosynthesis | 00540 | 0.0 | 77% | |
Blast2go | Biosynthesis of siderophore group nonribosomal peptides | 01053 | 0.0 | 77% | |
Blast2go | Metabolic pathways | 01100 | 0.0 | 77% | |
Blast2go | Oxidoreductases, Acting on the CH-OH group of donors, With NAD(+) or NADP(+) as acceptor. | EC:1.1.1.- | - | 0.0 | 77% |
Source | GOs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Blast2go | metabolic process | GO:0008152 | Biological Process | 0.0 | 77% |
Blast2go | NAD binding | GO:0051287 | Molecular Function | 0.0 | 77% |
Blast2go | nucleotidyltransferase activity | GO:0016779 | Molecular Function | 0.0 | 77% |
Blast2go | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | GO:0016616 | Molecular Function | 0.0 | 77% |
Blast2go | plastid | GO:0009536 | Cellular Component | 0.0 | 77% |
Source | InterPros | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | PAP/25A-associated | IPR002058 | - | 0.0 | - |
Sma3 | Nucleotidyl transferase domain | IPR002934 | - | 0.0 | - |
Sma3 | Aldehyde dehydrogenase, conserved site | IPR016160 | - | 0.0 | - |
Full-Lengther Next Prediction |
---|
Fln status: unknown
Fln database: testcode
Fln msg: Non coding ORF found >= 200 nt
Test code: 0
Test Code was used to find complete genes when there was not found a reliable orthologue. The best ORF (Open Reading Frame) is shown, and only ORFs > 200pb were analyzed. Your ORF will be more reliable if a stop codon was found before the start codon. A Test Code value > 0.95 means the ORF is probably coding. A Test Code value < 0.74 means the ORF is probably non-coding. Test Code values in between 0.74 and 0.95 mean it is uncertain whether the ORF is coding or not.
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain