SustainPineDB

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Assembly info
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Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene12094

Length: 238 nt

UniGene Fasta

>biog2_v2.0_unigene12094
ATGCCTATGGAGGAATCATCTTCTTCTTTATCTATCGTAGCTGAGGCCCCTGGTCTGCTGAAGATATACGAATGGGGGACGGTTGAACGCTTGCTCGACGAGGGTACCGTTCCCCCTTCTTCGCAGCTCGGCGATGAATCCAAGGGAGGAGTGGCATCCAAGGACGTGGTCATCGATCCTGAAACAGGCGTCTTCGTTCGGCTCTTCCTTCCTCCGCTCGAAGTTACTGATGCAAAAC

Ace file of the UniGene biog2_v2.0_unigene12094

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene76957	2/2

Source	Descriptions	Term	Type	e value	Identity
AutoFact	[I] COG0657 Esterase/lipase	-	-	1.0e-13	36%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	78%
Blast2go	probable carboxylesterase 2-like	-	-	0.0	67%

Source	InterPros	Term	Type	Identity
Sma3	Regulator of chromosome condensation, RCC1	IPR000408	-	-
Sma3	Carboxylesterase, type B	IPR002018	-	-
Sma3	Lipase, GDXG, active site	IPR002168	-	-
Sma3	Lipocalin	IPR002345	-	-
Sma3	Alpha/beta hydrolase fold-3	IPR013094	-	-
Sma3	Peptidase S26A, signal peptidase I, serine active site	IPR019756	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9P0Y8

Fln msg: Distance to subject end: 261 aas, your sequence is shorter than subject: 79 - 357

Fln protein: MPMEESSSSLSIVAEAPGLLKIYEWGTVERLLDEGTVPPSSQLGDESKGGVASKDVVIDPETGVFVRLFLPPLEVTDAK

Protein Length: 80

Fln nts: ATGCCTATGGAGGAATCATCTTCTTCTTTATCTATCGTAGCTGAGGCCCCTGGTCTGCTGAAGATATACGAATGGGGGACGGTTGAACGCTTGCTCGACGAGGGTACCGTTCCCCCTTCTTCGCAGCTCGGCGATGAATCCAAGGGAGGAGTGGCATCCAAGGACGTGGTCATCGATCCTGAAACAGGCGTCTTCGTTCGGCTCTTCCTTCCTCCGCTCGAAGTTACTGATGCAAAAC

Fln Alignment:

biogeco2_mira_c8785___MPMEESSSSLSIVAEAPGLLKIYEWGTVERLLDEGTVPPSSQLGDESKGGVASKDVVIDPETGVFVRLFLPPLE
A9P0Y8__________________IPMESSPSSLSIVAEAPGMLRIYEDGTVDRLIDSSTVPPSSQLGDESREGVASEDVVIDPQTGVFVRIFLPRLE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain