SustainPineDB

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Assembly info
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ECs
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Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene12011

Length: 391 nt

UniGene Fasta

>biog2_v2.0_unigene12011
GCAGGGGAGTCAGACAAGTCCCCCCAGTGCAAATGGCTCTGTTGGATCATCATCCAACAGTCCTGAAGAGGTGAACGAAGTTCCAAAGCCAGCCGGAGGAAGAAGGCCACAGAGAGCAAATCAAGCTCCGGTGCAGTATGTCTTAAGTGAAAGCAGTGATGAAGATTACGAAAATGAAGTTGAGATCAACGATTCTGATTTTGTAGAAGATGATGATTAAACTGGAAAAGCTGCTCAATGCACAATGTACAGATTTACTTAGTATTCATGTTATTCTGATTTTCAATATAGTTGTATCTAAATATGGCATGTATGCTTGTGCAGGTCCTTTGTAAGGAATAAGCAGCTTTCTATCAAACTTCATAAATGCTATTCTTTAGCATCAATGAAA

Ace file of the UniGene biog2_v2.0_unigene12011

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene9849	2/2

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DNA topoisomerase II, putative n=1 Tax=Ricinus communis RepID=B9RVN3_RICCO	-	-	4.0e-05	34%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	80%
Blast2go	unknown [Picea sitchensis]	-	-	3.21293e-22	87%

Source	ECs	Term	Type	e value	Identity
Blast2go	DNA topoisomerase (ATP-hydrolyzing).	EC:5.99.1.3	-	3.21293e-22	87%

Source	GOs	Term	Type	e value	Identity
Blast2go	DNA topological change	GO:0006265	Biological Process	3.21293e-22	87%
Blast2go	DNA topoisomerase (ATP-hydrolyzing) activity	GO:0003918	Molecular Function	3.21293e-22	87%
Blast2go	ATP binding	GO:0005524	Molecular Function	3.21293e-22	87%
Blast2go	chromosome	GO:0005694	Cellular Component	3.21293e-22	87%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: D5AE71

Fln msg: your sequence is shorter than subject: 73 - 435

Fln protein: QGSQTSPPSANGSVGSSSNSPEEVNEVPKPAGGRRPQRANQAPVQYVLSESSDEDYENEVEINDSDFVEDDD*

Protein Length: 74

Fln nts: GCAGGGGAGTCAGACAAGTCCCCCCAGTGCAAATGGCTCTGTTGGATCATCATCCAACAGTCCTGAAGAGGTGAACGAAGTTCCAAAGCCAGCCGGAGGAAGAAGGCCACAGAGAGCAAATCAAGCTCCGGTGCAGTATGTCTTAAGTGAAAGCAGTGATGAAGATTACGAAAATGAAGTTGAGATCAACGATTCTGATTTTGTAGAAGATGATGATTAA___ACTGGAAAAGCTGCTCAATGCACAATGTACAGATTTACTTAGTATTCATGTTATTCTGATTTTCAATATAGTTGTATCTAAATATGGCATGTATGCTTGTGCAGGTCCTTTGTAAGGAATAAGCAGCTTTCTATCAAACTTCATAAATGCTATTCTTTAGCATCAATGAAA

Fln Alignment:

biogeco2_mira_c8686___PKPAGGRRPQRANQAPVQYVLSESSDEDYENEVEINDSDFVEDDD
D5AE71__________________PKPAGRSRPQRATRAPVQYVLSESSDEKDEDEDEISDSDFVEDDD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain