SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
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Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene11245

Length: 274 nt

UniGene Fasta

>biog2_v2.0_unigene11245
GCATCAACTATTGCTTCGAGCTTTGGGAAAGTTGTAACTGAAAATAAAGACCTTTCAGACTATAGACAAGAAGATCTTGCTCTTTCCTTACTGCGAATGATTTGCTACAATATTGGACAAATTGCATATTTGAATGCACTTCGTTATGGGCTCAAGCGAATATTTTTTGGAGGATTTTTCATACGTGGTCATGCATACACTATGGACACCATCTCATTTGCAGTAAAATTCTGGTCAAAAGGAGCAGCACAAGCAATGTTTTTGCGCCATGAAG

Ace file of the UniGene biog2_v2.0_unigene11245

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Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene8613	2/2

Source	Descriptions	Term	Type	Identity
AutoFact	PREDICTED: similar to ATPANK2 (PANTOTHENATE KINASE 2); pantothenate kinase n=1 Tax=Vitis vinifera RepID=UPI000198529D	-	-	82%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	98%
Blast2go	pantothenate kinase 2-like	-	-	94%

Source	ECs	Term	Type	e value	Identity
Blast2go	Pantothenate kinase.	EC:2.7.1.33	-	0.0	94%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Pantothenate and CoA biosynthesis	00770		0.0	94%
Blast2go	Metabolic pathways	01100		0.0	94%

Source	GOs	Term	Type	Identity
Blast2go	coenzyme A biosynthetic process	GO:0015937	Biological Process	94%
Blast2go	phosphorylation	GO:0016310	Biological Process	94%
Blast2go	protein binding	GO:0005515	Molecular Function	94%
Blast2go	ATP binding	GO:0005524	Molecular Function	94%
Blast2go	pantothenate kinase activity	GO:0004594	Molecular Function	94%

Source	InterPros	Term	Type	Identity
Sma3	Domain of unknown function DUF89	IPR002791	-	-
Sma3	Type II pantothenate kinase	IPR004567	-	-
Sma3	Pantothenate kinase, bacterial	IPR011602	-	-
Sma3	Pantothenate kinase, acetyl-CoA regulated, two-domain type	IPR015844	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: C0PQ15

Fln msg: Distance to subject end: 490 aas, your sequence is shorter than subject: 91 - 895

Fln protein: ASTIASSFGKVVTENKDLSDYRQEDLALSLLRMICYNIGQIAYLNALRYGLKRIFFGGFFIRGHAYTMDTISFAVKFWSKGAAQAMFLRHE

Protein Length: 92

Fln nts: GCATCAACTATTGCTTCGAGCTTTGGGAAAGTTGTAACTGAAAATAAAGACCTTTCAGACTATAGACAAGAAGATCTTGCTCTTTCCTTACTGCGAATGATTTGCTACAATATTGGACAAATTGCATATTTGAATGCACTTCGTTATGGGCTCAAGCGAATATTTTTTGGAGGATTTTTCATACGTGGTCATGCATACACTATGGACACCATCTCATTTGCAGTAAAATTCTGGTCAAAAGGAGCAGCACAAGCAATGTTTTTGCGCCATGAAG

Fln Alignment:

biogeco2_mira_c7761___ASTIASSFGKVVTENKDLSDYRQEDLALSLLRMICYNIGQIAYLNALRYGLKXXXXXXXXXXXHAYTMDTISFAVKFWSKGAAQAMFLRHE
C0PQ15__________________ASTIASSFGKVVTENKDLSDYRQEDLALSLLRMISYNIGQIAYLNALRYGLKRIFFGGFFIRGHAYTMDTISFAVKFWSKGAAQAMFLRHE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain