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UniGene Name: biog2_v2.0_unigene10810
Length: 195 nt
 UniGene Fasta
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| >biog2_v2.0_unigene10810
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Ace file of the UniGene biog2_v2.0_unigene10810
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If you push the Download ace button, you will download an ace file of this UniGene.
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| Annotations |
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| Parent Assembly | Parent UniGene | Reads (related/total) |
|---|---|---|
| SustainPine v2.0 | sp_v2.0_unigene3147 | 2/2 |
| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | Thioredoxin reductase n=1 Tax=Picea sitchensis RepID=B8LPW6_PICSI | - | - | 0.0 | 90% |
| Blast2go | nadph-dependent thioredoxin reductase 3-like | - | - | 0.0 | 89% |
| Source | ECs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | Oxidoreductases, Acting on a sulfur group of donors, With a disulfide as acceptor. | EC:1.8.4.- | - | 0.0 | 89% |
| Blast2go | Thioredoxin-disulfide reductase. | EC:1.8.1.9 | - | 0.0 | 89% |
| Source | KEGGs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | Pyrimidine metabolism | 00240 | 0.0 | 89% | |
| Blast2go | Selenocompound metabolism | 00450 | 0.0 | 89% |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | hydrogen peroxide catabolic process | GO:0042744 | Biological Process | 0.0 | 89% |
| Blast2go | oxidation-reduction process | GO:0055114 | Biological Process | 0.0 | 89% |
| Blast2go | cell redox homeostasis | GO:0045454 | Biological Process | 0.0 | 89% |
| Blast2go | regulation of chlorophyll biosynthetic process | GO:0010380 | Biological Process | 0.0 | 89% |
| Blast2go | regulation of starch biosynthetic process | GO:0010581 | Biological Process | 0.0 | 89% |
| Blast2go | removal of superoxide radicals | GO:0019430 | Biological Process | 0.0 | 89% |
| Blast2go | positive regulation of catalytic activity | GO:0043085 | Biological Process | 0.0 | 89% |
| Blast2go | enzyme activator activity | GO:0008047 | Molecular Function | 0.0 | 89% |
| Blast2go | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | GO:0016671 | Molecular Function | 0.0 | 89% |
| Blast2go | protein binding | GO:0005515 | Molecular Function | 0.0 | 89% |
| Blast2go | flavin adenine dinucleotide binding | GO:0050660 | Molecular Function | 0.0 | 89% |
| Blast2go | thioredoxin-disulfide reductase activity | GO:0004791 | Molecular Function | 0.0 | 89% |
| Blast2go | chloroplast stroma | GO:0009570 | Cellular Component | 0.0 | 89% |
| Source | InterPros | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Pyridine nucleotide-disulphide oxidoreductase, class-II | IPR000103 | - | 0.0 | - |
| Sma3 | Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain | IPR001327 | - | 0.0 | - |
| Sma3 | Thioredoxin reductase | IPR005982 | - | 0.0 | - |
| Sma3 | Pyridine nucleotide-disulphide oxidoreductase, class-II, active site | IPR008255 | - | 0.0 | - |
| Sma3 | IPR012335 | - | 0.0 | - | |
| Sma3 | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | IPR013027 | - | 0.0 | - |
| Sma3 | Thioredoxin domain | IPR013766 | - | 0.0 | - |
| Sma3 | NAD(P)-binding domain | IPR016040 | - | 0.0 | - |
| Sma3 | IPR017909 | - | 0.0 | - | |
| Sma3 | IPR017936 | - | 0.0 | - | |
| Sma3 | Thioredoxin, conserved site | IPR017937 | - | 0.0 | - |
| Full-Lengther Next Prediction |
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Fln status: unknown
Fln database: testcode
Fln msg: Sequence length < 200 nt
Test code: 0
Test Code was used to find complete genes when there was not found a reliable orthologue. The best ORF (Open Reading Frame) is shown, and only ORFs > 200pb were analyzed. Your ORF will be more reliable if a stop codon was found before the start codon. A Test Code value > 0.95 means the ORF is probably coding. A Test Code value < 0.74 means the ORF is probably non-coding. Test Code values in between 0.74 and 0.95 mean it is uncertain whether the ORF is coding or not.
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
