SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene10580

Length: 688 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene10580 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene343	3/3

Source	Descriptions	Term	Type	Identity
AutoFact	Saccharopine dehydrogenase [Arabidopsis thaliana] sp\|Q8LGI2.2\|SCPDH_ARATH RecName: Full=Probable mitochondrial saccharopine dehydrogenase At5g39410; Short=SDH gb\|AAD09232.1\| unknown [Arabidopsis thaliana] dbj\|BAB11014.1\| unnamed protein product [Arabidops	-	-	60%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	67%
Blast2go	probable mitochondrial saccharopine dehydrogenase at5g39410-like	-	-	75%

Source	GOs	Term	Type	Identity
Blast2go	metabolic process	GO:0008152	Biological Process	75%
Blast2go	catalytic activity	GO:0003824	Molecular Function	75%
Blast2go	binding	GO:0005488	Molecular Function	75%
Blast2go	vacuolar membrane	GO:0005774	Cellular Component	75%
Blast2go	mitochondrion	GO:0005739	Cellular Component	75%
Blast2go	chloroplast envelope	GO:0009941	Cellular Component	75%
Blast2go	plasma membrane	GO:0005886	Cellular Component	75%

Source	InterPros	Term	Type	e value	Identity
Sma3	NAD(P)-binding domain	IPR016040	-	0.0	-
Sma3	Saccharopine dehydrogenase / Homospermidine synthase	IPR005097	-	0.0	-

Full-Lengther Next Prediction

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain