SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: biogeco2 v2.0

UniGene Name: biog2_v2.0_unigene10183

Length: 609 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene biog2_v2.0_unigene10183 (antisense)

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
SustainPine v2.0	sp_v2.0_unigene17997	3/3

Source	Descriptions	Term	Type	Identity
AutoFact	acyl-CoA binding protein 4 [Arabidopsis thaliana] sp\|Q9MA55.1\|ACBP4_ARATH RecName: Full=Acyl-CoA-binding domain-containing protein 4; Short=Acyl-CoA binding protein 4 gb\|AAF64540.1\| unknown protein [Arabidopsis thaliana] gb\|AAP21266.1\| At3g05420 [Arabidop	-	-	55%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	64%
Blast2go	acyl- binding protein 4	-	-	73%

Source	GOs	Term	Type	Identity
Blast2go	response to jasmonic acid stimulus	GO:0009753	Biological Process	73%
Blast2go	lipid transport	GO:0006869	Biological Process	73%
Blast2go	response to ethylene stimulus	GO:0009723	Biological Process	73%
Blast2go	fatty-acyl-CoA binding	GO:0000062	Molecular Function	73%
Blast2go	protein binding	GO:0005515	Molecular Function	73%
Blast2go	nucleus	GO:0005634	Cellular Component	73%
Blast2go	cytosol	GO:0005829	Cellular Component	73%

Source	InterPros	Term	Type	Identity
Sma3	Acyl-CoA-binding protein, ACBP	IPR000582	-	-
Sma3	Kelch repeat type 1	IPR006652	-	-
Sma3	Kelch repeat type 2	IPR011498	-	-
Sma3	FERM/acyl-CoA-binding protein, 3-helical bundle	IPR014352	-	-
Sma3	Kelch-type beta propeller	IPR015915	-	-
Sma3	Galactose oxidase, beta-propeller	IPR015916	-	-
Sma3	Aldehyde dehydrogenase, conserved site	IPR016160	-	-

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain