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UniGene Name: biog2_v2.0_unigene9989
Length: 106 nt
 UniGene Fasta
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| >biog2_v2.0_unigene9989
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Ace file of the UniGene biog2_v2.0_unigene9989
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If you push the Download ace button, you will download an ace file of this UniGene.
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| Annotations |
|---|
| Parent Assembly | Parent UniGene | Reads (related/total) |
|---|---|---|
| SustainPine v2.0 | sp_v2.0_unigene3999 | 3/3 |
| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL | - | - | 0.0 | 60% |
| Blast2go | leucine-rich repeat receptor-like protein kinase | - | - | 0.0 | 69% |
| Source | ECs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | Transferases, Transferring phosphorous-containing groups, Protein-serine/threonine kinases. | EC:2.7.11.- | - | 0.0 | 69% |
| Blast2go | Transferases, Transferring phosphorous-containing groups, Protein-tyrosine kinases. | EC:2.7.10.- | - | 0.0 | 69% |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | protein phosphorylation | GO:0006468 | Biological Process | 0.0 | 69% |
| Blast2go | regulation of transcription, DNA-dependent | GO:0006355 | Biological Process | 0.0 | 69% |
| Blast2go | positive regulation of seed germination | GO:0010030 | Biological Process | 0.0 | 69% |
| Blast2go | protein serine/threonine kinase activity | GO:0004674 | Molecular Function | 0.0 | 69% |
| Blast2go | protein tyrosine kinase activity | GO:0004713 | Molecular Function | 0.0 | 69% |
| Blast2go | ATP binding | GO:0005524 | Molecular Function | 0.0 | 69% |
| Blast2go | cytoplasmic membrane-bounded vesicle | GO:0016023 | Cellular Component | 0.0 | 69% |
| Blast2go | regulation of seed maturation | GO:2000034 | Biological Process | 0.0 | 69% |
| Source | InterPros | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Alpha/beta hydrolase fold-1 | IPR000073 | - | 0.0 | - |
| Sma3 | Protein kinase, catalytic domain | IPR000719 | - | 0.0 | - |
| Sma3 | Leucine-rich repeat | IPR001611 | - | 0.0 | - |
| Sma3 | Enolpyruvate transferase domain | IPR001986 | - | 0.0 | - |
| Sma3 | Peptidase S33 | IPR002410 | - | 0.0 | - |
| Sma3 | Leucine-rich repeat, typical subtype | IPR003591 | - | 0.0 | - |
| Sma3 | Aminotransferases, class-I, pyridoxal-phosphate-binding site | IPR004838 | - | 0.0 | - |
| Sma3 | Proline iminopeptidase | IPR005944 | - | 0.0 | - |
| Sma3 | Phosphopantetheine attachment site | IPR006162 | - | 0.0 | - |
| Sma3 | Serine/threonine-protein kinase, active site | IPR008271 | - | 0.0 | - |
| Sma3 | Leucine-rich repeat-containing N-terminal, type 2 | IPR013210 | - | 0.0 | - |
| Sma3 | Protein kinase, ATP binding site | IPR017441 | - | 0.0 | - |
| Sma3 | IPR017442 | - | 0.0 | - | |
| Sma3 | HTH domain AraC-type, conserved site | IPR018062 | - | 0.0 | - |
| Full-Lengther Next Prediction |
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Fln status: unknown
Fln database: testcode
Fln msg: Sequence length < 200 nt
Test code: 0
Test Code was used to find complete genes when there was not found a reliable orthologue. The best ORF (Open Reading Frame) is shown, and only ORFs > 200pb were analyzed. Your ORF will be more reliable if a stop codon was found before the start codon. A Test Code value > 0.95 means the ORF is probably coding. A Test Code value < 0.74 means the ORF is probably non-coding. Test Code values in between 0.74 and 0.95 mean it is uncertain whether the ORF is coding or not.
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
